Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2753g00001 ATGCATATGCATCCCAATGCATGTATCTTCCTGCTTTGTATCTCTGTTTTGTTGAATGCCCTCTCAGCATCGAGCAACAATGGTGAGTCATTGATGTTGGGGTGTGGGCTGGGTGAAGGTGGTGGAAAAGATGCTGATGGAAGACAATGGAGCCCTGATAACAAGTACCTCAAAGAAGGGAATTCCATCACATCCAAATCCTCATTCCAAGACCCTTCCCTTTTATCTGAGATTCCATACATGACAGCTAGAGTTTTCACATCAGAAGCAACATACAAATTCCCTGTTCAACCCGATAAGCGGTACTGGCTCAGGCTCCATTTCTATCCCTCTGTTTATGGCAGTTTCAACCCTTCCAATTCATATTTCTCTGTCATAGCAAATGGGGTTACCCTTCTCAGCAATTTCAGCGCCTCAATTACATGTCAGGCCCTCTCACAAGCTTACCTTGACAGAGAGTATTCCCTTGCGCCTCTTAATTCAGATACTCTCACTCTTACCTTCAAGCCTTCTGACAAGCACGATGGGGCTTTCGCTTTTGTCAACGGTATTCAGCTGATCCAAATGCCTGAGTTGTTTGATTCAGCTTCGTTGGTGGGTTACACCGACCAAACCGTGGATGCAAAAAGTTTGCATCTTCAGACAATGTTCAGGTTAAACGTTGGTGGGCAATATATATCTCCAGCACAAGATTCTGGTCTGAGCAGAATGTGGTACGATGATACCCCTTACCTATATGGTGCAGCCACTGGTGTCACCAACCAAGCTGCAAAGGATGTCAAAATCAACTACCAGACCATGCCACAGTACATTGCTCCTCCCAATGTCTATTCCACATCACGATCCATGGGCAACAATAAGGATGTCAACATGGGATTCAATCTTACATGGATTTTCCAAGTTGATCCAAATTCCATGTACCTTACCAGGTTGCATTTCTGTGACTACTACTATTCCAAAATCAATGAGATTGTTTTCAATATCTTTGTCAACAATCAAACGGCTCAGGCTCAAGCAGATGTGATAGGGTGGACAGGTGGTAAAGGAGTGCCAACATACAAGGACTATGTTGTGTATGTCCAAGATGAGCCAGGTGATGATCAGCTTTGGCTTGCTTTGCACCCAGCACCTGATACAAAGCCAGAATACTATGATGCAATACTCAATGGGGTGGAGATTTTCAAGCTCAATGACACAAACCTTTCTGGACCCAATCCTCAGCCTTCTGAGATGCTGATTGAACATGAGGAGAAGGACAAGACTTTCCAAGACAATAAACATCATAATAGGACTTTTGTTATTGGTGGAGCTGCTGGAGGTGCCGCAGGTTTTGCCTTAGTGGCTGCAATATGTGTTGCTGTTCACCAAAAGAAGAAGAGAGCTCCGGGATCCTACTCCAACACATCAAGCTGGCTTCCCCTATATGGGAATTCTCACACAACTGGCACCAAATCCACAATGTCAACAGGGAAGAGCGTTGGTAGTAACAACAGATCAGTCATGGCTCAAGGACTGTGCCGCTATTTCTCCTTACAAGAGATGAAGCAAGCAACCAAGAATTTTGATGAGTCCAATGTTATTGGGGTAGGAGGATTTGGAAAGGTTTACAAGGGTGTTATTGATAATGGGGTTCAAGTGGCTATCAAAAGATCGAACCCACAATCAGAACAAGGAGTGAACGAATTCCAGACTGAGATTGAGATGCTTTCCAAATTGAGACACAAGCATTTGGTGTCTTTGATTGGTTTTTGCGAGGAAGATGAGGAAATGTGCCTGGTTTATGACTACATGGATCGTGGCACCATGAGGGAACATCTATACAAGGGAAACAAACCACTTGATACTCTATCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGCCTTCACTACCTTCACACGGGGGCAAAATATACCATCATTCATAGAGATGTCAAAACAACTAACATCCTCCTTGATGAAAATTGGGTTGCCAAGGTTTCAGATTTTGGATTGTCAAAAACGGGTCCAAACATGAACAATGATGGACATGTTAGTACTGTGGTGAAGGGTAGCTTTGGATACTTGGATCCTGAATATTTCAGGAGACAACAATTGACAGAAAAATCTGATGTCTACTCATTTGGGGTTGTCCTATTTGAGGCCCTATGTGCAAGACCTGCTTTGAATCCTAGCCTTCCAAAGGAACAGGTCAGCCTTGCGGATTGGGCTTTGCTTTGCAAAAGAAAAGGAACACTTGAGGATATTATTGATCCCAATCTAAAGGGAAAGATCCACCCAGAAAGCTTGAAGAAGTTTGCAGATGCTGCTGAAAAGTGTGTGTCTGATCATGGACTTGATCGCCCCTCCATGAATGATCTATTGTGGAATCTAGAATTTGCTCTCAATCTGCAAGAAAACCCCGATGGTCCAACACCCACTTCACGTATTGACCAAGGTGAGTTTGAAGAAGTTAGCTTGGAAAACAACGACATGGCAGCACATTATAAAAACCTTAGCCTTGGAAGTGACTATGAGCTTAGCCAGGACTCAAGTGAGAACTCGGCTGCAATCTTCTCACAAATTGTCAATCCGAAAGGCAGATGA 2595 0.4382 MHMHPNACIFLLCISVLLNALSASSNNGESLMLGCGLGEGGGKDADGRQWSPDNKYLKEGNSITSKSSFQDPSLLSEIPYMTARVFTSEATYKFPVQPDKRYWLRLHFYPSVYGSFNPSNSYFSVIANGVTLLSNFSASITCQALSQAYLDREYSLAPLNSDTLTLTFKPSDKHDGAFAFVNGIQLIQMPELFDSASLVGYTDQTVDAKSLHLQTMFRLNVGGQYISPAQDSGLSRMWYDDTPYLYGAATGVTNQAAKDVKINYQTMPQYIAPPNVYSTSRSMGNNKDVNMGFNLTWIFQVDPNSMYLTRLHFCDYYYSKINEIVFNIFVNNQTAQAQADVIGWTGGKGVPTYKDYVVYVQDEPGDDQLWLALHPAPDTKPEYYDAILNGVEIFKLNDTNLSGPNPQPSEMLIEHEEKDKTFQDNKHHNRTFVIGGAAGGAAGFALVAAICVAVHQKKKRAPGSYSNTSSWLPLYGNSHTTGTKSTMSTGKSVGSNNRSVMAQGLCRYFSLQEMKQATKNFDESNVIGVGGFGKVYKGVIDNGVQVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDEEMCLVYDYMDRGTMREHLYKGNKPLDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNNDGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKEQVSLADWALLCKRKGTLEDIIDPNLKGKIHPESLKKFADAAEKCVSDHGLDRPSMNDLLWNLEFALNLQENPDGPTPTSRIDQGEFEEVSLENNDMAAHYKNLSLGSDYELSQDSSENSAAIFSQIVNPKGR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2753g00001 864 Pfam Protein tyrosine and serine/threonine kinase 525 736 IPR001245 GO:0004672|GO:0006468
Gabi2753g00001 864 SMART serkin_6 521 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2753g00001 864 SUPERFAMILY Protein kinase-like (PK-like) 496 797 IPR011009 -
Gabi2753g00001 864 CDD STKc_IRAK 527 795 - -
Gabi2753g00001 864 FunFam FERONIA receptor-like kinase 30 190 - -
Gabi2753g00001 864 ProSiteProfiles Protein kinase domain profile. 521 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2753g00001 864 Gene3D Transferase(Phosphotransferase) domain 1 597 806 - -
Gabi2753g00001 864 FunFam receptor-like protein kinase FERONIA 483 596 - -
Gabi2753g00001 864 Gene3D - 33 190 - -
Gabi2753g00001 864 Gene3D - 211 397 - -
Gabi2753g00001 864 FunFam Receptor-like protein kinase FERONIA 597 812 - -
Gabi2753g00001 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Gabi2753g00001 864 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Gabi2753g00001 864 Gene3D Phosphorylase Kinase; domain 1 481 596 - -
Gabi2753g00001 864 PANTHER OS07G0166700 PROTEIN 505 801 IPR045272 GO:0004714|GO:0006468
Gabi2753g00001 864 Pfam Malectin-like domain 34 395 IPR024788 -
Gabi2753g00001 864 FunFam FERONIA receptor-like kinase 211 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2753g00001 Gabi-Chr2753 8229 10823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2753g00001 29 864 Receptor kinase-like Gene Family AT3G51550 54.233 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi2753g00001 Malectin_like 5.2e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2753g00001 - - gmx:100791236 1425.99