Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2742g00023 ATGGGGATGGCTGCAGAGTCACAGTTTCATGTGTTGGCTGTTGATGACAGTATCATAGATAGGAAACTCATTGAGAGGCTCCTCAAAACCTCTTCCTATCAAGTTACTACAGTTGATTCTGGTAGTAAGGCTTTAGAGTTTCTGGGCTTGCGTGAGAATGATGAGAGCAACCCAAGTACACCAGCTGTTTCTCCTAACAATCATCGGGAGGTGGAGGTGAATCTTGTTATAACAGACTACTGTATGCCTGGCATGACAGGATATGATTTGCTCAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATTAGTAGATGTTTGGAGGAAGGAGCAGAGGAGTTTTTCTTGAAGCCTGTGAGGCTGGCAGATTTGAATAGGCTTAAACCCCATATGAAGAAAACCAAGTTGAAAGATCAAAAGCAAGAAACAGCAGAAAAGCTTGAAAACTCAGAAGTTGAACAGCAGCAACAACAAATCCAAAATGACCAACAAGAAGCAACAAAATCCAAATATCTGGAGCCAGAGTTAGAGTCACATTCACAGCCAACTATAGAACAACAGCAACAGTCACTACAACAAGCCAACAACAGCAAGAGGAAGACCATGGAACAAGGGCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 717 0.424 MGMAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRENDESNPSTPAVSPNNHREVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLADLNRLKPHMKKTKLKDQKQETAEKLENSEVEQQQQQIQNDQQEATKSKYLEPELESHSQPTIEQQQQSLQQANNSKRKTMEQGLSPETDRTRPRYSGIATVV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2742g00023 238 CDD REC_typeA_ARR 11 141 - -
Gabi2742g00023 238 Coils Coil 147 183 - -
Gabi2742g00023 238 Coils Coil 198 218 - -
Gabi2742g00023 238 MobiDBLite consensus disorder prediction 146 163 - -
Gabi2742g00023 238 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 201 IPR045279 GO:0009736
Gabi2742g00023 238 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Gabi2742g00023 238 SUPERFAMILY CheY-like 8 153 IPR011006 -
Gabi2742g00023 238 MobiDBLite consensus disorder prediction 193 217 - -
Gabi2742g00023 238 Gene3D - 10 228 - -
Gabi2742g00023 238 MobiDBLite consensus disorder prediction 164 181 - -
Gabi2742g00023 238 SMART REC_2 9 142 IPR001789 GO:0000160
Gabi2742g00023 238 MobiDBLite consensus disorder prediction 146 238 - -
Gabi2742g00023 238 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2742g00023 Gabi-Chr2742 315484 317624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2742g00023 1 238 Response Regulator Gene Family AT3G57040 66.109 1.12e-102 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2742g00023 Response_reg 1.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2742g00023 K14492 - gmx:100814494 388.267