Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2742g00022 ATGGGGATGGCTGCAGAGTCACAGTTTCATGTGTTGGCTGTTGATGACAGTATCATAGATAGGAAACTCATTGAGAGGCTCCTCAAAACCTCTTCCTATCAAGTTACTACAGTTGATTCTGGTAGTAAGGCTTTAGAGTTTCTGGGCTTGCGTGAGAATGATGAGAGCAACCCAAGTACACCAGCTGTGGAGGTGAATCTTGTTATAACAGACTACTGTATGCCTGGCATGACAGGATATGATTTGCTCAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATTAGTAGATGTTTGGAGGAAGGAGCAGAGGAGTTTTTCTTGAAGCCTGTGAGGCTGGCAGATTTGAATAGGCTTAAACCCCATATGAAGAAAACCAAGTTGAAAGATCAAAAGCAAGAAACAGCAGAAAAGCTTGAAAACTCAGAAGTTGAACAGCAGCAACAACAAATCCAAAATGACCAACAAGAAGCAACAAAATCCAAATATCTGGAGCCAGAGTTAGAGTCACATTCACAGCCAACTATAGAACAACAGCAACAGTCACTACAACAAGCCAACAACAGCAAGAGGAAGACCATGGAACAAGGGCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 693 0.4228 MGMAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRENDESNPSTPAVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLADLNRLKPHMKKTKLKDQKQETAEKLENSEVEQQQQQIQNDQQEATKSKYLEPELESHSQPTIEQQQQSLQQANNSKRKTMEQGLSPETDRTRPRYSGIATVV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2742g00022 230 SUPERFAMILY CheY-like 8 145 IPR011006 -
Gabi2742g00022 230 Coils Coil 139 175 - -
Gabi2742g00022 230 Coils Coil 190 210 - -
Gabi2742g00022 230 CDD REC_typeA_ARR 11 133 - -
Gabi2742g00022 230 MobiDBLite consensus disorder prediction 138 155 - -
Gabi2742g00022 230 Pfam Response regulator receiver domain 11 130 IPR001789 GO:0000160
Gabi2742g00022 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 193 IPR045279 GO:0009736
Gabi2742g00022 230 Gene3D - 10 220 - -
Gabi2742g00022 230 ProSiteProfiles Response regulatory domain profile. 10 138 IPR001789 GO:0000160
Gabi2742g00022 230 MobiDBLite consensus disorder prediction 185 209 - -
Gabi2742g00022 230 SMART REC_2 9 134 IPR001789 GO:0000160
Gabi2742g00022 230 MobiDBLite consensus disorder prediction 138 230 - -
Gabi2742g00022 230 MobiDBLite consensus disorder prediction 156 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2742g00022 Gabi-Chr2742 315484 317624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2742g00022 1 230 Response Regulator Gene Family AT3G57040 64.435 1.60e-97 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2742g00022 Response_reg 3.9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2742g00022 K14492 - gmx:100814494 367.466