Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2740g00044 ATGACATTAACAACAACCTCATCAGAAACAGCTAGCACAAGCACAAGCACAAGCAGCAACACCTCCACGTCATCACCACCCTCACCCTTATCACATTCCCTCATCAACAACACTCTCTCAGACTCTCCCAAAACAGAGACCCCAAAAAAACCCAAAAGACCCAGAGACTGTAGCAAGCACCCGGTTTACCACGGTGTACGAAAGCGCAATTGGGGCAAATGGGTCTCTGAAATTCGCGAGCCACGCAAGAAATCACGCATCTGGCTTGGTACCTTCGCAACTCCAGAAATGGCAGCTAGAGCCCACGACGTTGCAGCTATCACCATTAAGGGTAACACAGCGATTCTCAACTTCCCAGAAATCGCTGACATGCTTCCCAGACCCGTCACGTGCTCCCCACGTGACATCCAAGCCGCAGCCACGTCAGCAGCAGCCATGGTTGAATTCGACCCTGTAGTGCAGAATTCAGAAGTGTCGGAGACAGAGTCCTCAGAGCTGAGTGAGATAGTTGAGCTTCCAAACATTGAAGAGAGTTTCGACTCGGTTGACTCGAGAACCGAGTTCATGTTGCCTGACTCGGTGGATAGTTATAGTTGGGTGTATCCTCCAATCGAGTTCTGTGCTACTTTTTCTGATGAGTTATTTGGAAATCAGAGTTTTATTGCAGATAATGAGTGTGAGATTCTTCCCATTTGGGATTGA 702 0.4858 MTLTTTSSETASTSTSTSSNTSTSSPPSPLSHSLINNTLSDSPKTETPKKPKRPRDCSKHPVYHGVRKRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAAITIKGNTAILNFPEIADMLPRPVTCSPRDIQAAATSAAAMVEFDPVVQNSEVSETESSELSEIVELPNIEESFDSVDSRTEFMLPDSVDSYSWVYPPIEFCATFSDELFGNQSFIADNECEILPIWD 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2740g00044 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 179 - -
Gabi2740g00044 233 MobiDBLite consensus disorder prediction 1 63 - -
Gabi2740g00044 233 CDD AP2 63 120 IPR001471 GO:0003700|GO:0006355
Gabi2740g00044 233 ProSiteProfiles AP2/ERF domain profile. 62 119 IPR001471 GO:0003700|GO:0006355
Gabi2740g00044 233 FunFam Ethylene-responsive transcription factor 2 61 120 - -
Gabi2740g00044 233 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
Gabi2740g00044 233 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Gabi2740g00044 233 MobiDBLite consensus disorder prediction 45 63 - -
Gabi2740g00044 233 MobiDBLite consensus disorder prediction 1 44 - -
Gabi2740g00044 233 Gene3D AP2/ERF domain 62 121 IPR036955 GO:0003700|GO:0006355
Gabi2740g00044 233 Pfam AP2 domain 61 111 IPR001471 GO:0003700|GO:0006355
Gabi2740g00044 233 SUPERFAMILY DNA-binding domain 62 119 IPR016177 GO:0003677
Gabi2740g00044 233 SMART rav1_2 62 125 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2740g00044 Gabi-Chr2740 234072 235133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2740g00044 36 203 AP2-EREBP Transcription Factor Family AT5G11590 55.959 9.66e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi2740g00044 AP2 5.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2740g00044 K09286 - gmx:100801780 285.804