Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2740g00034 ATGGGCGTGGACATGTCCAACAACACCAAAGACTTGTTTTCCTCTCCTGCTCTCTCACTTAGCCTTGCTGGGATATTTCGCCATGGTAGCATGGAGGTTGATGATGGGGATGAGGGTAGTAGAGGAGGTGAACGGCGAGAGGAAACCACCGTTGAGATTAGCAGCGAGAACTCAGGAGCAGTACTGAGATCAAGTGCAGATGATTATTTTGAAGGAGAGGATGATGATGATGGTGGTGGTAATGATGATGATGATGATGATGGGGATGGAGATAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGAAGAAGTATCACAGGCACACTGCTGAACAGATTAGAGAAATGGAAGCTCTTTTCAAAGAATCACCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAATTAGGCCTTGCTCCTAGGCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGCCATGAAAATTCATTGTTGAAGACAGAGCTAGAGAAACTAAGGGATGAAAATAGGGCCATGCGAGAAACCTCAAACAAATCTTGTTGCCCCAACTGTGGCATTGCCACAACTAACGTAGATGGTTCCTTTTCCACTGGAGAAAATCAACTTCGTATTGAAAATGCCAAACTCAAAGCTGAGGTAGAGAAGCTTCGAGCAACTTTAGGAAAATACCCACCAGGGACAACGTCTCCTTCATGTTCTGCTGGCCATGATGATGAAGAGAATAGAAGCTCTTTGGATTCTTACAATGGAATTTTTGGGCTTGACAAGTCAAGGATAATGGAGATAGTAAACCAAGCAACGGAGGAGCTCGTGAAGATGGCAAATATTGGAGAACCGTTATGGGTTCGTAGTGTTGAGACAGGTCGAGAAATACTTAACTATGATGAATATGTTGAAGAGTTCTCAGTTAAATATTCATGCAGTGGAAGCCCAAAGAGATTCATCGAAGCCTCAAGAGAGACTGCGTTTGTTTTTATGGATCTCCCACGGCTTGTCCAAAGTTTTCTAGATGTGAATCAATGGAAGGAAATGTTTCCGTGCTTAATATCAAAAGCAGCAAATGTTAATGTTATATGCAATGGAGAAGGTTCTAACAGGAATGGTGCGGTGCAATTGATGTTTGCTGAGTTGCAAATGCTCACTCCAATGGTGCCCACCAGAGAAGTGTATTTTGTCAGGTGCTGCAAACAGCTAAGTGAGGAACAGTGGGCAATCATTGATGTATCCATAGACAAAGTAGAGGACAACATTGACACATCCCTTGTGAAATGCAGAAAACGCCCATCAGGTTGCATTATTGAGGATAAGTCAAATGGCCATTGCAAGGTAATCTGGGTGGAGCACTTGGAATGCCAGAAGAGCACAGTTCATACAATGTATCGAGCCATTGTAAACAGTGGTTTAGCCTTTGGGGCAAGGCACTGGATTACAACACTGCAACTTCAATGTGAACGTTTAGTTTTCTACATGGCAACAAATGTTCCCATGAAGGATTCAACTGGTGTTGCCACATTGGCTGGGAGGAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAATTTCTGCCATGCAGTTGGAGCATCAAGCTTCCATACATGGAACAAAGTCACAGGTAAAACAGGAGAAGACATAAGGATTAGTTCTAGGAAGAACTTGAATGATCCTGGTGAACCTATTGGGGTTATCTTGTCAGCTGTTTCTTCTGTATGGCTTCCTGTCTCTCCTAATATTCTCTTTGATTTCTTGAGGGATGAAGCTCGTCGTAGTGAGTGGGATATCATGTTCAGTGGTGGGTCAGTGCATTCCATTGCAAATTTAGCTAAAGGACAAGACCGAGGCAATGTTGTAAACATCCAAAAAATAGAATCAAAAGAAAACAACAGTACGTGGATACTCCAAGATAGCTGCACAAATGATTATGAGTCAATGGTAGTATATGCTCCTGTGGACATAACTGGTATGCAATCTGTGATGACAGGATGTGATTCTAGTAATATTGCCATAATGCCATCAGGGTTCTCAATTCTTCCTGATGGGATGGAAGCAAGGCCATTGGTGATTACTTCAAGGCAAGAAGAAAAATACACAGAAGAAGGGTCTTTATTTACAATGGCATTTCAGATCCTTGCCAATGCTTCTCCAACAGCAAAGTTATCAACTGAGCCTGTGGAATCGGTCAAAAGTCTTGTATCTTGTACATTAAGAAATATCAGAACAAGTTTACAATGCGAAGATAGTTAG 2277 0.4212 MGVDMSNNTKDLFSSPALSLSLAGIFRHGSMEVDDGDEGSRGGERREETTVEISSENSGAVLRSSADDYFEGEDDDDGGGNDDDDDDGDGDKNKKKKKKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTELEKLRDENRAMRETSNKSCCPNCGIATTNVDGSFSTGENQLRIENAKLKAEVEKLRATLGKYPPGTTSPSCSAGHDDEENRSSLDSYNGIFGLDKSRIMEIVNQATEELVKMANIGEPLWVRSVETGREILNYDEYVEEFSVKYSCSGSPKRFIEASRETAFVFMDLPRLVQSFLDVNQWKEMFPCLISKAANVNVICNGEGSNRNGAVQLMFAELQMLTPMVPTREVYFVRCCKQLSEEQWAIIDVSIDKVEDNIDTSLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTVHTMYRAIVNSGLAFGARHWITTLQLQCERLVFYMATNVPMKDSTGVATLAGRKSILKLAQRMTWNFCHAVGASSFHTWNKVTGKTGEDIRISSRKNLNDPGEPIGVILSAVSSVWLPVSPNILFDFLRDEARRSEWDIMFSGGSVHSIANLAKGQDRGNVVNIQKIESKENNSTWILQDSCTNDYESMVVYAPVDITGMQSVMTGCDSSNIAIMPSGFSILPDGMEARPLVITSRQEEKYTEEGSLFTMAFQILANASPTAKLSTEPVESVKSLVSCTLRNIRTSLQCEDS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2740g00034 758 FunFam Homeobox-leucine zipper protein GLABRA 2 272 495 - -
Gabi2740g00034 758 MobiDBLite consensus disorder prediction 231 253 - -
Gabi2740g00034 758 MobiDBLite consensus disorder prediction 30 52 - -
Gabi2740g00034 758 Pfam Homeodomain 103 158 IPR001356 GO:0003677
Gabi2740g00034 758 Coils Coil 210 230 - -
Gabi2740g00034 758 CDD START_ArGLABRA2_like 267 495 - -
Gabi2740g00034 758 FunFam Homeobox-leucine zipper protein HDG1 88 176 - -
Gabi2740g00034 758 SUPERFAMILY Bet v1-like 518 720 - -
Gabi2740g00034 758 Coils Coil 159 189 - -
Gabi2740g00034 758 SUPERFAMILY Homeodomain-like 98 161 IPR009057 -
Gabi2740g00034 758 ProSitePatterns 'Homeobox' domain signature. 135 158 IPR017970 GO:0000981|GO:0006355
Gabi2740g00034 758 MobiDBLite consensus disorder prediction 69 87 - -
Gabi2740g00034 758 CDD homeodomain 107 158 IPR001356 GO:0003677
Gabi2740g00034 758 ProSiteProfiles START domain profile. 263 499 IPR002913 GO:0008289
Gabi2740g00034 758 Gene3D - 342 492 IPR023393 -
Gabi2740g00034 758 SMART START_1 272 496 IPR002913 GO:0008289
Gabi2740g00034 758 SMART HOX_1 102 164 IPR001356 GO:0003677
Gabi2740g00034 758 Gene3D - 89 173 - -
Gabi2740g00034 758 MobiDBLite consensus disorder prediction 29 113 - -
Gabi2740g00034 758 Pfam START domain 273 496 IPR002913 GO:0008289
Gabi2740g00034 758 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 100 753 IPR042160 -
Gabi2740g00034 758 ProSiteProfiles 'Homeobox' domain profile. 100 160 IPR001356 GO:0003677
Gabi2740g00034 758 MobiDBLite consensus disorder prediction 94 109 - -
Gabi2740g00034 758 SUPERFAMILY Bet v1-like 265 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2740g00034 Gabi-Chr2740 183090 188093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2740g00034 96 757 Homeobox Transcription Factor Family AT1G79840 65.569 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gabi2740g00034 START 5e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2740g00034 K09338 - gmx:100806193 1187.17