Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2740g00022 ATGGAGGTGTTCAAAGCAATTGCTCAGCAAGAACTTGCAGCTCATCATGGCAGTACTGCTATCAGAGCTGATCAGAAGAGTTACAGTTACAAGCAACTCATCTCATCTGCACAGAAGATATCTCATCTCTTGTGTGGCAATGGTGTCAAAACAGTGAGTTACACCGGAAATCTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAATTTGTTGCTGGAATACTTGGGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTAAGCTATCCAGAAGTAGAGCTCTTGCATGTGATTAATAATTCGGATGTGTCTGCAATACTAAGTACTGAAGACCATAGTGAATTAATGCAAAGCATTGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCGCCTGTTCTCAATGAGTCTTCAGAGAATGGGGAAATTGACCCAGACAGATTTTGCCTGGAGAATATTGGGAAATCAAATGAAGATCCAGCACTGATTTTGTACACTAGTGGGACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCATTTCCCAGGTTCAAACCTTGACAAAAGCATGGGAGTATGCATCTGCCGATCAGTTTCTGCATTGTCTACCGCTACATCATGTTCACGGGCTTTTCAATGGTTTACTGGCCCCTCTCTATGCAGGTTCCACGGTTGAGTTCATGCCAAAATTTAGTGTGAGGGGAATTTGGCAGAGATGGCGGGAGTCATATCCAACTGAAGGATCTAAGGCTGATGATGCAATAACTATGTTCACTGGAGTTCCAACTATATACACCCGATTGATACAAGGTTATCATGCTATGGATCCTGAGCTACAAGTTGCTTCAGCATCTGCTGCAAGGAATCTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCTCAGCCCGTTATGCAAGAGTGGGAAGCCATCACTGGGCATCGCTTATTAGAGCGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCATTGAAAGGTGAGCGTAAGGCAGGCACTGTTGGCAAACCATTTCCTGGTATACAGGTCAAGATTCTCGCGGATGAGGAGAGTGGGAGTGATAAAACTGGAGTGGGTGAGCTTTGTGTTAAAAGCCCTTCGTTGTTTAAAGAATATTATAAACTTCCTGAGGTAACGAAGGGATCATTTACTGATGATGGGTTCTTTAAGACTGGAGATACAGTTACTACAGATGAAGATGGATATTACATCATTCTAGGACGTACTAATGCTGATATTATCAAGGCTGGTGGCTATAAGCTGTCTGCATTAGAAATTGAATCAGTTATAATAGAGCATCCAGCTGTCTCAGAATGTTGTGTTTTGGGCTTACCAGACAAAGACTATGGAGAAGTTGTTGGTGCAATTATTGTACCAGAGGTTGATGTTAAACGAAAGCGAGATGAAGAGTCAAAGCCTGCATTAAGCCTAGAAGAATTGTCCACCTGGGCCAAAGACAAACTTGCACCTTACAAGATACCAACTCAACTATTCCTGTGGGACTCACTCCCTCGCAATGCAATGGGGAAGGTAAATAAAAAGGAGCTGAAGAAGCTGCTGGCTTCAGAAAAGTAA 1623 0.4313 MEVFKAIAQQELAAHHGSTAIRADQKSYSYKQLISSAQKISHLLCGNGVKTVSYTGNLGGARIGIVAKPSAEFVAGILGTWFSGGVAVPLALSYPEVELLHVINNSDVSAILSTEDHSELMQSIANKSSSQFFHLPPVLNESSENGEIDPDRFCLENIGKSNEDPALILYTSGTTGKPKGVVHTHRSIISQVQTLTKAWEYASADQFLHCLPLHHVHGLFNGLLAPLYAGSTVEFMPKFSVRGIWQRWRESYPTEGSKADDAITMFTGVPTIYTRLIQGYHAMDPELQVASASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKAGTVGKPFPGIQVKILADEESGSDKTGVGELCVKSPSLFKEYYKLPEVTKGSFTDDGFFKTGDTVTTDEDGYYIILGRTNADIIKAGGYKLSALEIESVIIEHPAVSECCVLGLPDKDYGEVVGAIIVPEVDVKRKRDEESKPALSLEELSTWAKDKLAPYKIPTQLFLWDSLPRNAMGKVNKKELKKLLASEK 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2740g00022 540 PANTHER ACYL-COA SYNTHETASE 28 534 - -
Gabi2740g00022 540 SUPERFAMILY Acetyl-CoA synthetase-like 12 537 - -
Gabi2740g00022 540 Gene3D - 5 424 IPR042099 -
Gabi2740g00022 540 Pfam AMP-binding enzyme 12 430 IPR000873 -
Gabi2740g00022 540 CDD MCS 18 534 - -
Gabi2740g00022 540 Gene3D - 427 540 IPR045851 -
Gabi2740g00022 540 PRINTS AMP-binding signature 163 174 IPR020459 -
Gabi2740g00022 540 PRINTS AMP-binding signature 175 183 IPR020459 -
Gabi2740g00022 540 Pfam AMP-binding enzyme C-terminal domain 441 526 IPR025110 -
Gabi2740g00022 540 ProSitePatterns Putative AMP-binding domain signature. 168 179 IPR020845 -
Gabi2740g00022 540 FunFam Acyl-CoA synthetase family member 3 10 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2740g00022 Gabi-Chr2740 118938 127553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2740g00022 162 538 Monolignol Biosynthesis Gene Families AT4G19010 28.718 2.09e-43 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2740g00022 K18660 - gmx:100813324 910.598