Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2740g00007 ATGATGTCTGAGAATCCTAACTGGTGGAGTATGCATCCACCATCATTGATCCCTCCCCAGTATGGTTTTGAATCTTCTTCAATCCCTTTTAATTCTTTGACAGATAATCCAGAGAACCCTCAATCATTGAGCCAACTTCTTTTCACTGGATTACCGGGAGAAGAAGAGAGAGTACTGGGATTGAGTCATTTTCAATCAAAAAAGTTGGAAAACTGGGATGAACATATTTTTAATCCATCAACCATAGTTCCTATTAATGTTGATGTAATAAAGCAAGAGGTTCCCCAAAGTGGCAACAACTTATATCACCATAGGCATGAGGAATTTCAGGTTTCTGGAGCTGGGTCATCTTGGTCACATATTTTGCCAGTGTCTTCCCCTAGGTCTAGTGTCCCTAGCTTTAACAGTAATAATTTATTGGAATTCACTTATAACAAAGCAGATCATAGAAAGAACCAACTACCAGATCACAAATCTGAGTCTAATAGCACAGCCACTGTTGGACTTTGCAAGAAGAATAGGGGTCAGCCTTCATCTTCAAGCCAACCCCCTCTGAAGGTGAGGAAGGAGAAACTAGGTGATAGAATTACAGCCCTTCACCAGCTAGTTTCTCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATCAGATTCCTGCAGGGTCAAATTGAGGCACTCAGTTCTCCTTACTTGGGCAATGGATCGAAAAACATAAGGAATCAACATTCTGTATATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTTTTGAATGACACTGGCCTCAAAAGAAAGGGAGCTCCAAACCAGGATGCAAAAGATAAACCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCTGTCTCTTGTACCCAACATGTTGGAAGTGAAAATGGAGGTGATTACTGGGCACCATGGGCACCTGCATAA 960 0.4188 MMSENPNWWSMHPPSLIPPQYGFESSSIPFNSLTDNPENPQSLSQLLFTGLPGEEERVLGLSHFQSKKLENWDEHIFNPSTIVPINVDVIKQEVPQSGNNLYHHRHEEFQVSGAGSSWSHILPVSSPRSSVPSFNSNNLLEFTYNKADHRKNQLPDHKSESNSTATVGLCKKNRGQPSSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNIRNQHSVYGERNSVFPEDPGQLLNDTGLKRKGAPNQDAKDKPKDLRSRGLCLVPVSCTQHVGSENGGDYWAPWAPA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2740g00007 319 FunFam Transcription factor bHLH123 family 186 249 - -
Gabi2740g00007 319 CDD bHLH_AtbHLH_like 186 233 IPR045239 -
Gabi2740g00007 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 186 237 IPR036638 GO:0046983
Gabi2740g00007 319 MobiDBLite consensus disorder prediction 158 185 - -
Gabi2740g00007 319 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 42 303 - -
Gabi2740g00007 319 MobiDBLite consensus disorder prediction 151 187 - -
Gabi2740g00007 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 176 225 IPR011598 GO:0046983
Gabi2740g00007 319 MobiDBLite consensus disorder prediction 254 287 - -
Gabi2740g00007 319 Gene3D - 186 243 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2740g00007 Gabi-Chr2740 50920 53581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2740g00007 53 265 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.763 6.69e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2740g00007 - - gmx:100802121 493.041