Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2737g00034 ATGTCTATACATGCTATCGGCTTACTATTGGAAGCAGTCTTCCTAAAAGCAAAATCTTTGCAGGTTCTTGAAAGGTTTAAAGAAGCTGCCCAATGTTGTAAAGTTATTCTGGACATAGTAGAGTCTTCATTGCCTGAAGGCTTGCCTGATAACTTTGGTGCTGAATGTAAATTGCAGGAGACCCTGAGCAAGGCAGTTGAGCTGCTACCAGAATTATGGAAACTTGCTGATTGTCCACGTCAAGCTATTTTGTCTTACCGACGAGCACTCCTTCATCAATGGAATCTTGACGTAGAGAATACAACAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTACATAGTGGAGGAGAAGCAGCACCCCCTAATCTCCGTTCTCAAATGGATGGCTCATTTGTACCTAGAAACAATATAGAAGAGGCTATACTTCTTTTAATGATTTTGTTAAGAAAAGTCTCTCTAAATAGAATTGAATGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTGTCTATTTCAGGAGATTTGACAGCTTTAGCCAATCAATTGGAAGAATTGCTCCCCGGGACTATCCCTCGGAGAGAAAGTTACCATTCTCTAGCTCTTTGTTATTATGGAGCAGGTAGGGACTTGGTAGCACTGGATCTTCTCAGAAAATTGCTGAGTAGTAGAGAGGACCCAAAACATGTTCCAGGTTTGTTAATGGCTTCTAAGTTATGTTCTGTGAACTCTAGTCTTGCAGAAGAAGGGGTAAGCTTTTCTCGCAGAGTGATTGAGAACTTGGATGGCAGATGTAATCAGTTAGAAAATGTTGCCAATTTCTTTCTTGGTGTTTCGCTTTCAGCACACTCAAAATTGGCCGTTTCTGATTCTGAGAGGTTTAAGAGACAATATGAAGCACTTCATGCCCTGGAAACTGCTAGCAGAATGACAAGAATGAGAGACCCCCTTGTACTATACCATCTCAGTTTAGAATATGCAGAGCAAAGGAAGTTGGATACTGCACTTTATTATACAAAGTGCTTTTTAAAACTGGAAGGTGGTTCTAATGTTAAAGGTTGGTTATTGTTAACTCGGATATTATCAGCTCAAAAACGGTTTTTGGATGCTGAATCTATTATCAATGCCGCTTTAGATCAGACTGGGAAATGGGATCAGGGTGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCACTTAAGGAATGCCATTGAGACGTATACTCAGCTTCTTGCTGTTCTTCAAATTCTGAGTAAAAGTTTTGGTTCCGGGAAGAAGCTATATAAGGACAATAGAGATCGTGCTAGGAACTTGGAAGTGGAAATATGGCACGATCTTGCTAATATATACATCAGTCTTTTACAGTGGCATGATGCGGAGGTGTGTCTTTCAAAATCTAAGGCCATCAAACCATACTCTGCTTCTAGATGTCATGCATTAGGTAGAATGTATGAAGCAAAGGGCCTTTACAAAGAGGCTCTAAAAGCTTTCCGTGATGCTTTGGACATTGATCCTGGCCATGTCCTCAGCTTAATCTCCACCGCCGTAGTTCTTAGACGATGCAGTGATCAATCAAATCCTGCAGTAAGAATCTTTCTGATGGATGCAATACGGCATGATAGATTGAGTGCTTCTGCTTGGTATAATCTTGGCCTTCTTCACAAGGCTGAGGGTACAGTGTCATCATTAGTAGAAGCTACAGAATGTTTTCAGGCAGCACACTTTCTTGAAGAATCTGAACCGGTTGAAACTTTTAGATGA 1773 0.4044 MSIHAIGLLLEAVFLKAKSLQVLERFKEAAQCCKVILDIVESSLPEGLPDNFGAECKLQETLSKAVELLPELWKLADCPRQAILSYRRALLHQWNLDVENTTKIQKEFVVFLLHSGGEAAPPNLRSQMDGSFVPRNNIEEAILLLMILLRKVSLNRIEWDPSILDHLSFALSISGDLTALANQLEELLPGTIPRRESYHSLALCYYGAGRDLVALDLLRKLLSSREDPKHVPGLLMASKLCSVNSSLAEEGVSFSRRVIENLDGRCNQLENVANFFLGVSLSAHSKLAVSDSERFKRQYEALHALETASRMTRMRDPLVLYHLSLEYAEQRKLDTALYYTKCFLKLEGGSNVKGWLLLTRILSAQKRFLDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGHLRNAIETYTQLLAVLQILSKSFGSGKKLYKDNRDRARNLEVEIWHDLANIYISLLQWHDAEVCLSKSKAIKPYSASRCHALGRMYEAKGLYKEALKAFRDALDIDPGHVLSLISTAVVLRRCSDQSNPAVRIFLMDAIRHDRLSASAWYNLGLLHKAEGTVSSLVEATECFQAAHFLEESEPVETFR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2737g00034 590 SUPERFAMILY TPR-like 11 416 IPR011990 GO:0005515
Gabi2737g00034 590 SMART tpr_5 388 421 IPR019734 GO:0005515
Gabi2737g00034 590 SMART tpr_5 195 228 IPR019734 GO:0005515
Gabi2737g00034 590 SMART tpr_5 548 584 IPR019734 GO:0005515
Gabi2737g00034 590 SMART tpr_5 317 350 IPR019734 GO:0005515
Gabi2737g00034 590 SMART tpr_5 10 43 IPR019734 GO:0005515
Gabi2737g00034 590 SMART tpr_5 444 477 IPR019734 GO:0005515
Gabi2737g00034 590 SMART tpr_5 478 511 IPR019734 GO:0005515
Gabi2737g00034 590 SMART tpr_5 352 385 IPR019734 GO:0005515
Gabi2737g00034 590 SUPERFAMILY TPR-like 389 562 IPR011990 GO:0005515
Gabi2737g00034 590 Gene3D Tetratricopeptide repeat domain 421 586 IPR011990 GO:0005515
Gabi2737g00034 590 ProSiteProfiles TPR repeat profile. 478 511 IPR019734 GO:0005515
Gabi2737g00034 590 PANTHER PROTEIN NPG1 1 590 IPR043376 -
Gabi2737g00034 590 Gene3D Tetratricopeptide repeat domain 7 420 IPR011990 GO:0005515
Gabi2737g00034 590 Pfam Tetratricopeptide repeat 481 511 IPR013105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2737g00034 Gabi-Chr2737 269140 275570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2737g00034 1 590 Calmodulin-binding Proteins AT4G28600 61.242 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2737g00034 K21843 - gmx:100800762 993.801