Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2737g00032 ATGAAGTGCTTGCGCTCAGGGGAGCCATTAGGAGGAGCAGATGAAATGTTTCCTTCATCTGAATCTCTTGCAACCAAGAATTTTTCAGCAAGTGGACATTCTTGCCTTGACAAGAAGCTGGACACTGGCAATATAGAAGAAGCTGAATCATCCTTGCGTGAGAGTGGTGTCCTGAACTATGAGGAAGCTAGAGCTCTGCTAGGAAGATATGAATATCAGAAAGGAAATTTTGTAGCTGCTTTACATGTCTTTGAGGGAATAGATATAAGTATTGTGACTCCTAAGATCAAAATTGCCCTTTCCAGAAGCAGAGAACGCAATAAGAAACATTCCCATAATCATGCTGAACCGCAAATGTCTATACATGCTATCGGCTTACTATTGGAAGCAGTCTTCCTAAAAGCAAAATCTTTGCAGGTTCTTGAAAGGTTTAAAGCTGCCCAATGTTGTAAAGTTATTCTGGACATAGTAGAGTCTTCATTGCCTGAAGGCTTGCCTGATAACTTTGGTGCTGAATGTAAATTGCAGGAGACCCTGAGCAAGGCAGTTGAGCTGCTACCAGAATTATGGAAACTTGCTGATTGTCCACGTCAAGCTATTTTGTCTTACCGACGAGCACTCCTTCATCAATGGAATCTTGACGTAGAGAATACAACAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTACATAGTGGAGGAGAAGCAGCACCCCCTAATCTCCGTTCTCAAATGGATGGCTCATTTGTACCTAGAAACAATATAGAAGAGGCTATACTTCTTTTAATGATTTTGTTAAGAAAAGTCTCTCTAAATAGAATTGAATGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTGTCTATTTCAGGAGATTTGACAGCTTTAGCCAATCAATTGGAAGAATTGCTCCCCGGGACTATCCCTCGGAGAGAAAGTTACCATTCTCTAGCTCTTTGTTATTATGGAGCAGGTAGGGACTTGGTAGCACTGGATCTTCTCAGAAAATTGCTGAGTAGTAGAGAGGACCCAAAACATGTTCCAGGTTTGTTAATGGCTTCTAAGTTATGTTCTGTGAACTCTAGTCTTGCAGAAGAAGGGGTAAGCTTTTCTCGCAGAGTGATTGAGAACTTGGATGGCAGATGTAATCAGTTAGAAAATGTTGCCAATTTCTTTCTTGGTGTTTCGCTTTCAGCACACTCAAAATTGGCCGTTTCTGATTCTGAGAGGTTTAAGAGACAATATGAAGCACTTCATGCCCTGGAAACTGCTAGCAGAATGACAAGAATGAGAGACCCCCTTGTACTATACCATCTCAGTTTAGAATATGCAGAGCAAAGGAAGTTGGATACTGCACTTTATTATACAAAGTGCTTTTTAAAACTGGAAGGTGGTTCTAATGTTAAAGGTTGGTTATTGTTAACTCGGATATTATCAGCTCAAAAACGGTTTTTGGATGCTGAATCTATTATCAATGCCGCTTTAGATCAGACTGGGAAATGGGATCAGGGTGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCACTTAAGGAATGCCATTGAGACGTATACTCAGCTTCTTGCTGTTCTTCAAATTCTGAGTAAAAGTTTTGGTTCCGGGAAGAAGCTATATAAGGACAATAGAGATCGTGCTAGGAACTTGGAAGTGGAAATATGGCACGATCTTGCTAATATATACATCAGTCTTTTACAGTGGCATGATGCGGAGGTGTGTCTTTCAAAATCTAAGGCCATCAAACCATACTCTGCTTCTAGATGTCATGCATTAGGTAGAATGTATGAAGCAAAGGGCCTTTACAAAGAGGCTCTAAAAGCTTTCCGTGATGCTTTGGACATTGATCCTGGCCATGTCCTCAGCTTAATCTCCACCGCCGTAGTTCTTAGACGATGCAGTGATCAATCAAATCCTGCAGTAAGAATCTTTCTGATGGATGCAATACGGCATGATAGATTGAGTGCTTCTGCTTGGTATAATCTTGGCCTTCTTCACAAGGCTGAGGGTACAGTGTCATCATTAGTAGAAGCTACAGAATGTTTTCAGGCAGCACACTTTCTTGAAGAATCTGAACCGGTTGAAACTTTTAGATGA 2124 0.4068 MKCLRSGEPLGGADEMFPSSESLATKNFSASGHSCLDKKLDTGNIEEAESSLRESGVLNYEEARALLGRYEYQKGNFVAALHVFEGIDISIVTPKIKIALSRSRERNKKHSHNHAEPQMSIHAIGLLLEAVFLKAKSLQVLERFKAAQCCKVILDIVESSLPEGLPDNFGAECKLQETLSKAVELLPELWKLADCPRQAILSYRRALLHQWNLDVENTTKIQKEFVVFLLHSGGEAAPPNLRSQMDGSFVPRNNIEEAILLLMILLRKVSLNRIEWDPSILDHLSFALSISGDLTALANQLEELLPGTIPRRESYHSLALCYYGAGRDLVALDLLRKLLSSREDPKHVPGLLMASKLCSVNSSLAEEGVSFSRRVIENLDGRCNQLENVANFFLGVSLSAHSKLAVSDSERFKRQYEALHALETASRMTRMRDPLVLYHLSLEYAEQRKLDTALYYTKCFLKLEGGSNVKGWLLLTRILSAQKRFLDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGHLRNAIETYTQLLAVLQILSKSFGSGKKLYKDNRDRARNLEVEIWHDLANIYISLLQWHDAEVCLSKSKAIKPYSASRCHALGRMYEAKGLYKEALKAFRDALDIDPGHVLSLISTAVVLRRCSDQSNPAVRIFLMDAIRHDRLSASAWYNLGLLHKAEGTVSSLVEATECFQAAHFLEESEPVETFR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2737g00032 707 Gene3D Tetratricopeptide repeat domain 546 703 IPR011990 GO:0005515
Gabi2737g00032 707 ProSiteProfiles TPR repeat profile. 595 628 IPR019734 GO:0005515
Gabi2737g00032 707 Pfam Tetratricopeptide repeat 598 628 IPR013105 -
Gabi2737g00032 707 SMART tpr_5 595 628 IPR019734 GO:0005515
Gabi2737g00032 707 SMART tpr_5 469 502 IPR019734 GO:0005515
Gabi2737g00032 707 SMART tpr_5 561 594 IPR019734 GO:0005515
Gabi2737g00032 707 SMART tpr_5 505 538 IPR019734 GO:0005515
Gabi2737g00032 707 SMART tpr_5 665 701 IPR019734 GO:0005515
Gabi2737g00032 707 SMART tpr_5 434 467 IPR019734 GO:0005515
Gabi2737g00032 707 SMART tpr_5 312 345 IPR019734 GO:0005515
Gabi2737g00032 707 SUPERFAMILY TPR-like 506 679 IPR011990 GO:0005515
Gabi2737g00032 707 PANTHER PROTEIN NPG1 1 707 IPR043376 -
Gabi2737g00032 707 Gene3D Tetratricopeptide repeat domain 101 540 IPR011990 GO:0005515
Gabi2737g00032 707 SUPERFAMILY TPR-like 314 533 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2737g00032 Gabi-Chr2737 268252 275570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2737g00032 1 707 Calmodulin-binding Proteins AT4G28600 59.116 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2737g00032 K21843 - gmx:100800762 1169.45