Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2737g00031 ATGAAGTGCTTGCGCTCAGGGGAGCCATTAGGAGGAGCAGATGAAATGTTTCCTTCATCTGAATCTCTTGCAACCAAGAATTTTTCAGCAAGTGGACATTCTTGCCTTGACAAGAAGCTGGACACTGGCAATATAGAAGAAGCTGAATCATCCTTGCGTGAGAGTGGTGTCCTGAACTATGAGGAAGCTAGAGCTCTGCTAGGAAGATATGAATATCAGAAAGGAAATTTTGTAGCTGCTTTACATGTCTTTGAGGGAATAGATATAAGTATTGTGACTCCTAAGATCAAAATTGCCCTTTCCAGAAGCAGAGAACGCAATAAGAAACATTCCCATAATCATGCTGAACCGCAAATGTCTATACATGCTATCGGCTTACTATTGGAAGCAGTCTTCCTAAAAGCAAAATCTTTGCAGGTTCTTGAAAGGTTTAAAGAAGCTGCCCAATGTTGTAAAGTTATTCTGGACATAGTAGAGTCTTCATTGCCTGAAGGCTTGCCTGATAACTTTGGTGCTGAATGTAAATTGCAGGAGACCCTGAGCAAGGCAGTTGAGCTGCTACCAGAATTATGGAAACTTGCTGATTGTCCACGTCAAGCTATTTTGTCTTACCGACGAGCACTCCTTCATCAATGGAATCTTGACGTAGAGAATACAACAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTACATAGTGGAGGAGAAGCAGCACCCCCTAATCTCCGTTCTCAAATGGATGGCTCATTTGTACCTAGAAACAATATAGAAGAGGCTATACTTCTTTTAATGATTTTGTTAAGAAAAGTCTCTCTAAATAGAATTGAATGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTGTCTATTTCAGGAGATTTGACAGCTTTAGCCAATCAATTGGAAGAATTGCTCCCCGGGACTATCCCTCGGAGAGAAAGTTACCATTCTCTAGCTCTTTGTTATTATGGAGCAGGTAGGGACTTGGTAGCACTGGATCTTCTCAGAAAATTGCTGAGTAGTAGAGAGGACCCAAAACATGTTCCAGCACACTCAAAATTGGCCGTTTCTGATTCTGAGAGGTTTAAGAGACAATATGAAGCACTTCATGCCCTGGAAACTGCTAGCAGAATGACAAGAATGAGAGACCCCCTTGTACTATACCATCTCAGTTTAGAATATGCAGAGCAAAGGAAGTTGGATACTGCACTTTATTATACAAAGTGCTTTTTAAAACTGGAAGGTGGTTCTAATGTTAAAGGTTGGTTATTGTTAACTCGGATATTATCAGCTCAAAAACGGTTTTTGGATGCTGAATCTATTATCAATGCCGCTTTAGATCAGACTGGGAAATGGGATCAGGGTGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCACTTAAGGAATGCCATTGAGACGTATACTCAGCTTCTTGCTGTTCTTCAAATTCTGAGTAAAAGTTTTGGTTCCGGGAAGAAGCTATATAAGGACAATAGAGATCGTGCTAGGAACTTGGAAGTGGAAATATGGCACGATCTTGCTAATATATACATCAGTCTTTTACAGTGGCATGATGCGGAGGTGTGTCTTTCAAAATCTAAGGCCATCAAACCATACTCTGCTTCTAGATGTCATGCATTAGGTAGAATGTATGAAGCAAAGGGCCTTTACAAAGAGGCTCTAAAAGCTTTCCGTGATGCTTTGGACATTGATCCTGGCCATGTCCTCAGCTTAATCTCCACCGCCGTAGTTCTTAGACGATGCAGTGATCAATCAAATCCTGCAGTAAGAATCTTTCTGATGGATGCAATACGGCATGATAGATTGAGTGCTTCTGCTTGGTATAATCTTGGCCTTCTTCACAAGGCTGAGGGTACAGTGTCATCATTAGTAGAAGCTACAGAATGTTTTCAGGCAGCACACTTTCTTGAAGAATCTGAACCGGTTGAAACTTTTAGATGA 1977 0.4077 MKCLRSGEPLGGADEMFPSSESLATKNFSASGHSCLDKKLDTGNIEEAESSLRESGVLNYEEARALLGRYEYQKGNFVAALHVFEGIDISIVTPKIKIALSRSRERNKKHSHNHAEPQMSIHAIGLLLEAVFLKAKSLQVLERFKEAAQCCKVILDIVESSLPEGLPDNFGAECKLQETLSKAVELLPELWKLADCPRQAILSYRRALLHQWNLDVENTTKIQKEFVVFLLHSGGEAAPPNLRSQMDGSFVPRNNIEEAILLLMILLRKVSLNRIEWDPSILDHLSFALSISGDLTALANQLEELLPGTIPRRESYHSLALCYYGAGRDLVALDLLRKLLSSREDPKHVPAHSKLAVSDSERFKRQYEALHALETASRMTRMRDPLVLYHLSLEYAEQRKLDTALYYTKCFLKLEGGSNVKGWLLLTRILSAQKRFLDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGHLRNAIETYTQLLAVLQILSKSFGSGKKLYKDNRDRARNLEVEIWHDLANIYISLLQWHDAEVCLSKSKAIKPYSASRCHALGRMYEAKGLYKEALKAFRDALDIDPGHVLSLISTAVVLRRCSDQSNPAVRIFLMDAIRHDRLSASAWYNLGLLHKAEGTVSSLVEATECFQAAHFLEESEPVETFR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2737g00031 658 Gene3D Tetratricopeptide repeat domain 490 654 IPR011990 GO:0005515
Gabi2737g00031 658 SMART tpr_5 385 418 IPR019734 GO:0005515
Gabi2737g00031 658 SMART tpr_5 546 579 IPR019734 GO:0005515
Gabi2737g00031 658 SMART tpr_5 128 161 IPR019734 GO:0005515
Gabi2737g00031 658 SMART tpr_5 616 652 IPR019734 GO:0005515
Gabi2737g00031 658 SMART tpr_5 420 453 IPR019734 GO:0005515
Gabi2737g00031 658 SMART tpr_5 456 489 IPR019734 GO:0005515
Gabi2737g00031 658 SMART tpr_5 512 545 IPR019734 GO:0005515
Gabi2737g00031 658 SMART tpr_5 313 346 IPR019734 GO:0005515
Gabi2737g00031 658 ProSiteProfiles TPR repeat profile. 546 579 IPR019734 GO:0005515
Gabi2737g00031 658 SUPERFAMILY TPR-like 457 630 IPR011990 GO:0005515
Gabi2737g00031 658 PANTHER PROTEIN NPG1 1 351 IPR043376 -
Gabi2737g00031 658 Pfam Tetratricopeptide repeat 549 579 IPR013105 -
Gabi2737g00031 658 SUPERFAMILY TPR-like 313 485 IPR011990 GO:0005515
Gabi2737g00031 658 Gene3D Tetratricopeptide repeat domain 95 489 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2737g00031 Gabi-Chr2737 268252 275570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2737g00031 1 658 Calmodulin-binding Proteins AT4G28600 55.663 0.0 706