Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2737g00017 ATGGATCATGTGATTGGTGGGAAGTTTAAACTGGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTATTTAGCTGTTAATGTACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAATTATTGCAACCGGAAATTCACATTGAAGTCAGTGTTAATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCACGAGGTTTCCTTCACCGTGACATAAAGCCAGACAATTTTCTAATGGGCCTAGGACGTAAAGCAAATCAAGTGTACATCATTGACTATGGCCTTGGAAAAAAATATAGGGATCTTCAGACTCATAGGCACATTCCATACAGGGAAAACAAGAACCTTACAGGCACAGCACGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTATTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTGAAGGCCGGCACCAAAAAACAAAAATATGATAAAATCAGTGAGACAAAGGTGTCAACTCGCATAGAGGTGCTCTGCAAATCATATCCCCCTGAGTTTGTATCATACTTCCATTATTGCCGGTCATTGCGGTTTGAGGACAAGCCAGATTATTCATATTTAAAGAGACTTTTCCGAGACCTGTTTATTCGAGAAGGCTATCAATTTGACTATGTTTTTGACTGGACTATATTGAAGTATCCACAGATTGGTGGCAACTCTAGAGGGCGGCATGACACTGGCAAGGCAGCTATGTATGGAGCCACACCTTTACATAGACCAGAAAAAGTCTCAGTCGGGAAAGAGATTAGAGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCCGAAGGAACCCTGCAAGTTCTAGTCCTCGTGCTGATCATGTCAGACAAAGGACTTATGAGGATGTAGCAGTACACAATGATTTGGTAATATACAGTTCCTCACGATACGGCAGCAGTTCAAGAAGAGCCATGGTCTCATCAAACAAGCAAATTTCGTCAGGCGATTATACTGGCAGGCTGACCTCAAATGGGGGTCGTACACCTGGCCCGCATAGAGTTCAACCTGTGTATGAAACCAAACAAGCAACATTTATGCGCAGTGGGTCTACAAGAGGCAACCGTGATGATCCTCTGAGGAGCTTTGAGCTCCTCAATATCAGGAAGTAA 1356 0.4329 MDHVIGGKFKLGRKIGSGSFGELYLAVNVQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLGKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISETKVSTRIEVLCKSYPPEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGGNSRGRHDTGKAAMYGATPLHRPEKVSVGKEIREKFSGAVEAFSRRNPASSSPRADHVRQRTYEDVAVHNDLVIYSSSRYGSSSRRAMVSSNKQISSGDYTGRLTSNGGRTPGPHRVQPVYETKQATFMRSGSTRGNRDDPLRSFELLNIRK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2737g00017 451 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gabi2737g00017 451 CDD STKc_CK1_delta_epsilon 8 282 - -
Gabi2737g00017 451 MobiDBLite consensus disorder prediction 384 419 - -
Gabi2737g00017 451 FunFam Casein kinase 1-like protein 1 330 - -
Gabi2737g00017 451 Gene3D Transferase(Phosphotransferase) domain 1 1 323 - -
Gabi2737g00017 451 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Gabi2737g00017 451 FunFam Putative Casein kinase I 1 85 - -
Gabi2737g00017 451 PANTHER CASEIN KINASE-RELATED 9 351 - -
Gabi2737g00017 451 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2737g00017 451 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2737g00017 451 MobiDBLite consensus disorder prediction 384 411 - -
Gabi2737g00017 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gabi2737g00017 451 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2737g00017 Gabi-Chr2737 180521 188207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2737g00017 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 1.37e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gabi2737g00017 Pkinase 1.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2737g00017 K08960 - gmx:100789031 790.03