Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2737g00001 ATGGGTCTTAGAGACATTGGTGCTTCACTGCCCCCTGGGTTTCGGTTTTATCCGAGTGATGAGGAGTTAGTCCTTCATTACCTTTACAAAAAGATCACAAATGAGGAAGCTCTCAAGGGTACCTTGGTTGAAATTGACTTGCACATATGCGAGCCATGGCAGCTTCCTGAGGTGGCTAAGCTCAATGCAAATGAATGGTACTTCTTCAGCTTTCGTGACCGCAAATATGCAACTGGCTTTCGGACCAATCGGGCAACGACATCTGGCTATTGGAAAGCAACGGGAAAGGATCGTACGGTGTTCGACCCAATCACGCGTGAGGTTGTAGGGATGAGGAAGACATTAGTGTTCTATAGGAACAGAGCTCCAAATGGAATCAAAACGGGATGGATCATGCATGAGTTTCGCTTGGAGACCCCACACATGCCCCCTAAGGAGGACTGGGTTTTGTGTAGAGTATTTCATAAAGGCAAAGCAGACAACAGTGCCAAACTCAACCAACAACTCATGTTCGAGACCACAGTTCCATCCCTAACTTTGGCTTCATCATCACCAACCAACCAAACTATGCCGGTTGGGTATAACCAACTTGCCCCTTTCTCTTCCACAATGGCAACCCATCATCATCAAAACCCAAACCAAAATAATTCTTTGATGAATCTCCTTCAGTTTTCTCGGGAAACAAATTACAACAACGGTAGTAGTGTTACTCAAATTAGTCCCAAAGGTGACGATGAATATGGGTTCTTATGGGACATGGATTTGGAAGAAAATAGCTTCCATGATGGGGTGGCCTCAAACTTGGACGGAATGAGATTCGAGGTTGATAATAATAGTATGGTCTTGTTATAA 852 0.446 MGLRDIGASLPPGFRFYPSDEELVLHYLYKKITNEEALKGTLVEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVFDPITREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKADNSAKLNQQLMFETTVPSLTLASSSPTNQTMPVGYNQLAPFSSTMATHHHQNPNQNNSLMNLLQFSRETNYNNGSSVTQISPKGDDEYGFLWDMDLEENSFHDGVASNLDGMRFEVDNNSMVLL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2737g00001 283 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Gabi2737g00001 283 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Gabi2737g00001 283 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 222 - -
Gabi2737g00001 283 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Gabi2737g00001 283 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2737g00001 Gabi-Chr2737 40742 45654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2737g00001 6 239 NAC Transcription Factor Family AT1G56010 44.628 1.88e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi2737g00001 NAM 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2737g00001 - - gmx:100783645 503.827