Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2735g00005 ATGGCAGAACCATCCACCGCCGAAACCACCTCCGCCAGCGATGCTCATCCGGCTTCCTCGTCGCTCAACGTCGTCGGATTAACGAGCGACGAGAACAAGAAGCCTTCTCCCAAGTTCTTGGACGAGCCTGAAGACTCCAACATCCAAGCGGTTTCGTCCGGCGACACTCCGTACACGTCAGCTACCACCTTCGAAGAATTGAATCTCTCACCGGAGCTTTTGAAGGGACTCTACGTGGAGATGAAGTTCCAGAAACCTAGTAAGATCCAAGCCGTAACCTTGCCTATGATCTTGAATCCTCCGAATAGGGATTTGATCGTACACGCGCATAACGGTTCCGGAAAAACCACGTGTTTCCTTCTTGGTATGCTTAGTCGAGTTGATCCAAAGTTGCAGGCTCCTCAAGCTTTCTGCATTTGCCCAACCAGGGAGTTGGCTATTCAGAATGCAATAGCTGGTGGCCCCATACTTCCGGAAGAAAAGCTATATCCCTCCAAAGGGATATCTGATCAGTATTTAGGATCTGCAGTTGTAGAGCCAGCTTGGTTGAACTATTTCAGGGAATGGGGTCCAAAAACTGATTACAGTATAGATGATGAGTTGAAGAAGGTGGAGAAGTTGTTGCCTGGGAAGCTAAAATCTGCTTTTGAAAATTTTGTAAAGAGTTTACCAAAGGAAGTGCTGGGAGCGGAAGGACCCACAGGTCCAAAGGTGAAGAATAATTGGAGTGGTGATGAAGCATGA 744 0.4812 MAEPSTAETTSASDAHPASSSLNVVGLTSDENKKPSPKFLDEPEDSNIQAVSSGDTPYTSATTFEELNLSPELLKGLYVEMKFQKPSKIQAVTLPMILNPPNRDLIVHAHNGSGKTTCFLLGMLSRVDPKLQAPQAFCICPTRELAIQNAIAGGPILPEEKLYPSKGISDQYLGSAVVEPAWLNYFREWGPKTDYSIDDELKKVEKLLPGKLKSAFENFVKSLPKEVLGAEGPTGPKVKNNWSGDEA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2735g00005 247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 149 IPR027417 -
Gabi2735g00005 247 Pfam Vacuolar protein sorting-associated protein 62 168 246 IPR009291 -
Gabi2735g00005 247 Gene3D - 41 153 IPR027417 -
Gabi2735g00005 247 PANTHER F1C9.34 PROTEIN 168 246 - -
Gabi2735g00005 247 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 62 91 IPR014014 GO:0003724
Gabi2735g00005 247 MobiDBLite consensus disorder prediction 1 57 - -
Gabi2735g00005 247 MobiDBLite consensus disorder prediction 1 30 - -
Gabi2735g00005 247 Pfam DEAD/DEAH box helicase 88 148 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2735g00005 Gabi-Chr2735 33677 34878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2735g00005 62 148 Eukaryotic Initiation Factors Gene Family AT3G19760 39.080 2.83e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2735g00005 K18655 - gmx:100784739 223.402