Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2734g00021 ATGGAAAACGTTACAATCCTAGGTAAGGAAGAGGATCAGTTGAATTTGCCTTCTGGGTTTAGGTTTCACCCAACAGATGAAGAGCTTATTAGTCATTACCTTTACAAAAAGGTAAATGATTCCCTCTTTTCTGCTAAGGCCATTGGAGAGGTGGACTTGAACAAGTGTGAACCTTGGGATTTACCATGGAAAGCTAAGATGGGAGAAAAAGAGTGGTACTTTTTCTGTGTGAGGGACAGAAAATACCCAACTGGTTTGAGAACCAACAGAGCTACTGAAGCAGGATACTGGAAGGCCACAGGGAAGGATAAAGAGATTTACAGAGGAAAATCTCTAATTGGAATGAAGAAAACTCTTGTTTTCTACAAAGGAAGGGCACCCAAAGGAGAGAGAACCAATTGGGTCATGCATGAATATAGACTTGAGGGTAAATTCTCTGTTCACAACCTCCCTAAAACTGCAAAGAATGAGTGGGTGATTTGCAGGGTGTTTCAGAAGAATTCAGAAGGCAAGAAAACACATATTTCTGGTATAACGAGGTTGGACTCTTTTGAAAATGAATTGGGTTCTTCTGTTCTGCCACCCCTCACAGATTCATCACCTTTCATTGGCAAGACCAAAGCACTGAGTGTGAATGAATTCCCTAACGTGCCCTGCTTCTCCAATCCAATTGATGTCCAAAGAAACCAAGGAGGGATCTTTGATTCCTTCAGTAACTCTCCTTTTGGGGTTTCTTCAAATCATTCAGAGATTCTTCCAAGAATCCCAATCTCTTCTGGTTCATTCTACTCTACTACTGAAGGGGTTCAATCTCCACCAAATTTGCCATTACCAGGTTCTGTTTACAACATCCAGGACCAGACGATCCTTAGAGCCTTACTTGATAACCATGGATCAAACATGAGGAATAGTTTGGTAAGTGTCTCACAGGAAGCATGTCTGAATACTGTTGTCAACGCTGAAATCTCTTCAATTGTATCAAATTTTGATATGGGTAGGAGGCCCTTTGACAATCAGCAACCCCTACCTGCTTCAACTGCACCATTGGACCTTGCTAGCTTATGGAATTACTAA 1074 0.4153 MENVTILGKEEDQLNLPSGFRFHPTDEELISHYLYKKVNDSLFSAKAIGEVDLNKCEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLIGMKKTLVFYKGRAPKGERTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKNSEGKKTHISGITRLDSFENELGSSVLPPLTDSSPFIGKTKALSVNEFPNVPCFSNPIDVQRNQGGIFDSFSNSPFGVSSNHSEILPRIPISSGSFYSTTEGVQSPPNLPLPGSVYNIQDQTILRALLDNHGSNMRNSLVSVSQEACLNTVVNAEISSIVSNFDMGRRPFDNQQPLPASTAPLDLASLWNY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2734g00021 357 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Gabi2734g00021 357 Gene3D NAC domain 25 171 IPR036093 GO:0003677|GO:0006355
Gabi2734g00021 357 FunFam NAC domain-containing protein 100-like 25 170 - -
Gabi2734g00021 357 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Gabi2734g00021 357 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Gabi2734g00021 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2734g00021 Gabi-Chr2734 268834 270323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2734g00021 14 357 NAC Transcription Factor Family AT5G07680 57.558 4.02e-129 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi2734g00021 NAM 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2734g00021 - - gmx:100170719 547.354