Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi2730g00028 | ATGGCCTCATCCTTAATGTTACCAGCAGTTGCAACATTGAAACCTTGTACCACTCTATCATCATCATCATGTTCACGAAGACTTGCTCTCTTTAACCTTGTCACTGCCGGTGGTATTGGTTATTCAGCTCTCCCACAATCCCAGTTGTTCGGTGCAAGAGGATTAGAGTTGTTTAATGTAGCAGAAGCTACTGCTGCAGAAAAGCTAGCCCAACCAGACCAAAATTTATTTGACTGGGTCAAAAATGACAAGAGAAGATTTCTCCATGTTGTGTACCGTGTTGGAGACTTGGAGAAAACTATAAAGTTCTACACTGAATGCCTTGGTATGAAGCTATTGAGAAAACGTGATATACCTGAAGACAGATATTCAAACGCTTTTCTTGGATATGGGCCTGAAGATTCCAATTTTACAGTTGAACTTACTTACAATTATGGAGAGGATAGCTATGACATTGGAACTGGTTTTGGTCATTTTGGTATTGCGACCGAAGATGTTGCTAAGACGGTGAATCTAATAAAGGCAAAAGGGGGAAAGGTTACCAGGGAACCAGGGCCTGTCAAAGGTGGAAGCACAGTTGTTGCTTTCATTGAAGATCCTGATGGTTATACGTTTGAGCTTTTGGAGAGAGGACCTACTCCTGAACCCCTATGCCAAGTGATGCTACGAGTGGGTGATCTTGATGGTGCCATAGCCTTCTATCAAAAAGCTCTTGGCATGACACTTCTCCGCAAGAGGGACAACCCTGACTACAAGTACACAGTAGCCATGATGGGCTATGGTCCTGAAGATAAGAATACTGTTCTAGAACTGACATATAACTATGGCGTCACCAATTATGACAAAGGAAATGGTTATGGACAGATTGCAATAGGCACAAATGATGTCTATAAGACAGCAGAAGCAATCAAATTGTGTGGAGGGAAGATTATCCGTGAACCTGGGCCCTTGCCAGGTATCGACACCAAGATAGCAGTTTGCTTGGACCCTGATGGTTGGAAATTGGCATTTGTTGACAATATTGATTTTCTGAAGGAATTAGAGTGA | 1047 | 0.425 | MASSLMLPAVATLKPCTTLSSSSCSRRLALFNLVTAGGIGYSALPQSQLFGARGLELFNVAEATAAEKLAQPDQNLFDWVKNDKRRFLHVVYRVGDLEKTIKFYTECLGMKLLRKRDIPEDRYSNAFLGYGPEDSNFTVELTYNYGEDSYDIGTGFGHFGIATEDVAKTVNLIKAKGGKVTREPGPVKGGSTVVAFIEDPDGYTFELLERGPTPEPLCQVMLRVGDLDGAIAFYQKALGMTLLRKRDNPDYKYTVAMMGYGPEDKNTVLELTYNYGVTNYDKGNGYGQIAIGTNDVYKTAEAIKLCGGKIIREPGPLPGIDTKIAVCLDPDGWKLAFVDNIDFLKELE | 348 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi2730g00028 | 348 | ProSitePatterns | Glyoxalase I signature 2. | 153 | 165 | IPR018146 | GO:0004462|GO:0046872 | |
| Gabi2730g00028 | 348 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 85 | 212 | IPR029068 | - | |
| Gabi2730g00028 | 348 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 217 | 340 | IPR029068 | - | |
| Gabi2730g00028 | 348 | PANTHER | LACTOYLGLUTATHIONE LYASE | 68 | 348 | - | - | |
| Gabi2730g00028 | 348 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 86 | 210 | IPR037523 | - | |
| Gabi2730g00028 | 348 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 216 | 340 | IPR037523 | - | |
| Gabi2730g00028 | 348 | Gene3D | - | 213 | 348 | IPR029068 | - | |
| Gabi2730g00028 | 348 | NCBIfam | lactoylglutathione lyase | 87 | 211 | IPR004361 | GO:0004462|GO:0046872 | |
| Gabi2730g00028 | 348 | ProSitePatterns | Glyoxalase I signature 1. | 219 | 240 | IPR018146 | GO:0004462|GO:0046872 | |
| Gabi2730g00028 | 348 | CDD | GlxI_Ni | 88 | 208 | - | - | |
| Gabi2730g00028 | 348 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 219 | 337 | IPR004360 | - | |
| Gabi2730g00028 | 348 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 87 | 207 | IPR004360 | - | |
| Gabi2730g00028 | 348 | FunFam | Lactoylglutathione lyase | 213 | 348 | - | - | |
| Gabi2730g00028 | 348 | Gene3D | - | 59 | 211 | IPR029068 | - | |
| Gabi2730g00028 | 348 | ProSitePatterns | Glyoxalase I signature 1. | 89 | 110 | IPR018146 | GO:0004462|GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi2730g00028 | Gabi-Chr2730 | 341556 | 344880 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi2730g00028 | 217 | 339 | Calmodulin-binding Proteins | AT1G08110 | 27.027 | 5.19e-12 | 63.2 |