Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2730g00027 ATGGCCAAAATTGCTCTCGGAACCACCCTAGAGGCCACCAAGCCAGACTGCATTCAGGCCCTCGTCGTTGAATTCATTGCCACCTTTCTCTTTGTCTTTGTTGGCGTGGGTTCTGCCATGGCCGTTGACAAGCTAGGTGGAGGAGATGCACTAGTGGGCTTGTTTGCTGTGGCCGTGGCACATGCACTTGTGGTGGCTGTAATGATTTCCGCCGCCCACATTTCCGGTGGCCACCTCAACCCCGCCGTCACCCTTGGCCTCCTCGCCGGCGGTCATATCACCGTCTTCCGTTCCATCCTCTATTGGATTGATCAATTGGTAGCATCTGCAGCTGCTTCTTATCTGCTTTACTACCTCTCAGGGGGACTGGCAATTCCAGTTCACACGCTGGCTAGTGGAGTGGGGTATGGTCAAGGAGTAATTTGGGAGATTGTGTTGACATTCTCTTTGTTGTTCGCTGTGTATGGTACAATGGTTGATCCCAAGAAGGGAGCACTTGCTGGGATTGGACCAACGCTGGTTGGGTTTGTAGTTGGGGCAAACATCCTTGCTGGTGGGGCATTCTCAGCTGCTTCTATGAACCCAGCGAGATCTTTTGGTCCAGCCTTGGTTAGTGGCAATTGGACTGATCACTGGGTTTATTGGGTTGGGCCTCTCATTGGTGGTGGCCTTGCAGGTTTCATCTACGAGACTTTCTTTATTGACCGATCTCATGTTCCACTCCGTGGAGATGAAGAAACCTATTAG 747 0.5181 MAKIALGTTLEATKPDCIQALVVEFIATFLFVFVGVGSAMAVDKLGGGDALVGLFAVAVAHALVVAVMISAAHISGGHLNPAVTLGLLAGGHITVFRSILYWIDQLVASAAASYLLYYLSGGLAIPVHTLASGVGYGQGVIWEIVLTFSLLFAVYGTMVDPKKGALAGIGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYETFFIDRSHVPLRGDEETY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2730g00027 248 SUPERFAMILY Aquaporin-like 11 241 IPR023271 -
Gabi2730g00027 248 PANTHER AQUAPORIN-8 4 237 IPR034294 -
Gabi2730g00027 248 FunFam Probable aquaporin TIP1-1 2 245 - -
Gabi2730g00027 248 PRINTS Major intrinsic protein family signature 175 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2730g00027 248 PRINTS Major intrinsic protein family signature 60 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2730g00027 248 PRINTS Major intrinsic protein family signature 142 160 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2730g00027 248 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2730g00027 248 PRINTS Major intrinsic protein family signature 212 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2730g00027 248 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2730g00027 248 Pfam Major intrinsic protein 12 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2730g00027 248 ProSitePatterns MIP family signature. 78 86 IPR022357 -
Gabi2730g00027 248 Gene3D Glycerol uptake facilitator protein. 2 242 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2730g00027 Gabi-Chr2730 324419 325719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2730g00027 1 246 Major Intrinsic Protein MIP AT2G25810 78.862 5.74e-128 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2730g00027 K09873 - gmx:100811447 416.772