Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2722g00038 ATGATGCAGCTTGCCTATCATGGCTTCTTGATGAATCTCGTATGCTTTGCATTAACATTGATCCTATTGCATGGAGGAGAACCAAGGGTAGGAGCTTCAGCTTCCACTCATGATGTCGTCAAAATCGGTGCCATTTTCACTTTAAAAACTATAAACGGACGTGTTTCCAAAATGGCCATCGAAGCTGCTGAGAAAGATGTGAATTCTGATCCTCGCATCCTTGGTGGACGTAAATTATCCATAACCATTCATGATTCCAACTTCAGTGGTTTTCTTGGCTTCATGGGGGCCCTTAAGTTCTTGATGACTGACACTGTAGCTATAATTGGTCCACAAAGTTCAGTAATGGCTCATACTCTTTCGCATCTTGCAAATGAGCTGCATGTTCCTCTATTGTCCTTCATTGCTCTGGATCCCACCTTAACACCTCTTCAGCATCCTTATTTTGTACAAACAGCACCCAATGATCAGTTCCAAATGACTGCAGTTGCGGACATAATTAGTTACTTTCGTTGGAAAGAAATCATTGTAGTTTATAGTGATGATGATCAGAGTCGAAATGGGATAACTGTATTAGGGGACAAACTTGCAGAGAGGCGCTGTAAGATATCTTACAAAGCAGCACTGCCACCTGATCCAACCGCAAGTCCAAGTGATGTTGCTGATCAGTTGGTGAAGATTCAAAGTGTGGAAGCTCGAATAATTGTTTTACACACCTTCACAAAAACAGGTGTCTTGGTTTTTGATGTGGCTCAAAAACTAGGGATGATAAGCAAAGGGTATGTTTGGATAGCTACTGCTTGGTTATCAACTATTTTGGATTCAAGTTCAAATTCACTACTACCTTTAAATTCTTATAACACAATTCAAGGAGTACTTACTCTTCGCCCTCACACCCCTCAATCAAGAAAAAAAGAGGTATTTACCTCAAGGTGGAAACAGATAAGTAATGGCTCATTTGGGTTAAACCCATATGGACTCTATGCTTATGATTCTGTTTGGATGATTGCTTATGCACTAAAATCATTTTTTGATCAGAATGGTACCATTTCATTCTCTAATAATACAAATTTAATTGGTATGAGGGGAGATACTCTTGATCTTGGTGCTTTGAGCGTTTTTGATGGAGGGAAACAGTTACTTGATAACATATTGCACATTAATATGACTGGATTGACTGGACCTATTCAATTTGGTTCAGATAGATCCCCTTTACATCCATCATATGACATCCTCAATGTAATTGCTACTGGTTATAGGAGTATTGGATACTGGTCTAATTATTCTGGTCTCTCTGTGATAACCCCTGAGAAACTTTACACAAAGCCTGCCAATCGTTCAATTTCAAACCAACATCTATATGATGTCATATGGCCTGGAAATACAACAGAAAAGCCTCGTGGATGGGTTCTAAATAATGGAAGGCAACTCAGAATTGGAGTCCCCAACAGAGTTAGTTACCAGGACATGGTCTCACAAATAAATGGCACCAATGCAGTTCACGGATATTGCATAGATATATTCCTGGCAGCCATAAAATTGCTTCCATATGCAGTTCAACATAGGTTCATTCTGTTTGGAGATGGGCATAAGAACCCAAGCTACAATGATCTTGTCAATATGATTACTGCTGATGCTTTTGATGCTGCTATAGGTGACATTACAATTGTCACTGACCGAACTAGGATTGTTGATTTTACTCAACCATATATAGAGTCAGGGCTAGTTGTGGTTGCTCCAGTAAAAAGATTGAAGTCGAGTGCTTGGGCTTTCTTGCGACCATTTACTCCACTCATGTGGGGTGTCACTGCACTTTTTTTCCTTATTGTTGGAGCAGTGGTGTGGATTCTTGAACATAGAACAAATGATGAGTTTCGGGGGCCTCCAAAGAAACAGATAGCTACAATTCTTTGGTTTAGTTTCTCAACTCTGTTCTTTTCTCACAGAGAAAACATAGTTAGTCCACTTGGTCGTATTGTATTGATAATCTGGCTTTTTGTGGTTCTGATAATCAATTCAAGCTACACTGCAAGCTTGACATCAATTCTCACTGTACAACAGCTGTCCTCACCCATAACAGGAATTGATACCTTGATATCCAGCAATAAACCTATAGGGTTCCAAGTAGGTTCATTTGCTGAAAACTATTTGACCAAGGAACTCAACATCCCAAAACGTAGACTTGTTCCTCTTGGCTCACCAGAAGAATATGCTATTGCTCTTGAGAGGGGAACTGTTGCAGCTGTGGTAGATGAAAGGCCATATGTAGAACTCTTCCTGTCAAACCACTGCAAATTCTCAATTAGGGGCCAAGAGTTCACCAAAGGTGGATGGGGATTTGCATTCCCTAGGGACTCTCCTTTAGCAATTGATATGTCAACTGCTATTCTGAATCTATCTGAGAATGGTGAGCTTCAGAGGATCCATGAAAAGTGGCTTTCAAAAAAGGCTTGTGATTTACATAGTACTGATAATGAGCAGCTTCAATTAAATAGCTTCCGGGGCCTGTTTCTAATCTGTGGGATAGCATTTTTCCTGGCCCTTCTTATCTACTTTATTTCAATGGTACACCAATTCTGTCAAAACTCCCCTGAAAAATCTGATCCTTCTAATGGTTGCAGCTCACGCTCTGCACGCATCCAGACATTTCTAAATTTTGTTGATGAGAAAGAAGACATATCACACAAGAAGTCTAAAAGAAAACTTGAGGATATTTCTTCAATTGCTTATTCCAAAGAAAATCATTTAAGGAGCATATCCAAGAGAGTACAAATGGACATTTCCCAAGAGGCTCCTTTTGGTTAA 2805 0.3979 MMQLAYHGFLMNLVCFALTLILLHGGEPRVGASASTHDVVKIGAIFTLKTINGRVSKMAIEAAEKDVNSDPRILGGRKLSITIHDSNFSGFLGFMGALKFLMTDTVAIIGPQSSVMAHTLSHLANELHVPLLSFIALDPTLTPLQHPYFVQTAPNDQFQMTAVADIISYFRWKEIIVVYSDDDQSRNGITVLGDKLAERRCKISYKAALPPDPTASPSDVADQLVKIQSVEARIIVLHTFTKTGVLVFDVAQKLGMISKGYVWIATAWLSTILDSSSNSLLPLNSYNTIQGVLTLRPHTPQSRKKEVFTSRWKQISNGSFGLNPYGLYAYDSVWMIAYALKSFFDQNGTISFSNNTNLIGMRGDTLDLGALSVFDGGKQLLDNILHINMTGLTGPIQFGSDRSPLHPSYDILNVIATGYRSIGYWSNYSGLSVITPEKLYTKPANRSISNQHLYDVIWPGNTTEKPRGWVLNNGRQLRIGVPNRVSYQDMVSQINGTNAVHGYCIDIFLAAIKLLPYAVQHRFILFGDGHKNPSYNDLVNMITADAFDAAIGDITIVTDRTRIVDFTQPYIESGLVVVAPVKRLKSSAWAFLRPFTPLMWGVTALFFLIVGAVVWILEHRTNDEFRGPPKKQIATILWFSFSTLFFSHRENIVSPLGRIVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDTLISSNKPIGFQVGSFAENYLTKELNIPKRRLVPLGSPEEYAIALERGTVAAVVDERPYVELFLSNHCKFSIRGQEFTKGGWGFAFPRDSPLAIDMSTAILNLSENGELQRIHEKWLSKKACDLHSTDNEQLQLNSFRGLFLICGIAFFLALLIYFISMVHQFCQNSPEKSDPSNGCSSRSARIQTFLNFVDEKEDISHKKSKRKLEDISSIAYSKENHLRSISKRVQMDISQEAPFG 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2722g00038 934 SMART GluR_14 478 815 IPR001320 GO:0015276|GO:0016020
Gabi2722g00038 934 Gene3D - 58 406 - -
Gabi2722g00038 934 Pfam Receptor family ligand binding region 57 414 IPR001828 -
Gabi2722g00038 934 Gene3D - 155 431 - -
Gabi2722g00038 934 FunFam Glutamate receptor 155 317 - -
Gabi2722g00038 934 Gene3D - 588 720 - -
Gabi2722g00038 934 PIRSF IGluLR_plant 7 932 IPR017103 -
Gabi2722g00038 934 FunFam Glutamate receptor 588 718 - -
Gabi2722g00038 934 SUPERFAMILY Periplasmic binding protein-like I 35 469 IPR028082 -
Gabi2722g00038 934 FunFam Glutamate receptor 472 588 - -
Gabi2722g00038 934 SUPERFAMILY Periplasmic binding protein-like II 471 815 - -
Gabi2722g00038 934 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 881 IPR015683 -
Gabi2722g00038 934 Pfam Bacterial extracellular solute-binding proteins, family 3 499 814 IPR001638 -
Gabi2722g00038 934 CDD PBP1_GABAb_receptor_plant 41 433 IPR044440 -
Gabi2722g00038 934 FunFam Glutamate receptor 714 817 - -
Gabi2722g00038 934 Gene3D - 479 587 - -
Gabi2722g00038 934 CDD GluR_Plant 475 813 - -
Gabi2722g00038 934 Pfam Ligand-gated ion channel 815 843 IPR001320 GO:0015276|GO:0016020
Gabi2722g00038 934 Gene3D - 742 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2722g00038 Gabi-Chr2722 345057 350377 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2722g00038 11 901 Ion Channels AT2G17260 61.878 0.0 1148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2722g00038 K05387 - qsu:112010597 1337.4