Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2722g00030 ATGGATAACGAGGTGTTAGAATTTGATATTGGTATTGGAGGAGGCGATGGAGAATACGACGATGACGGTGGAGACATTGAACATCCTATTGATGAAGATGAATTGGCTGATAGCAGTGGCGGTGTTGGTGGGGGAGCAATTGGTGGTGAATTATATTTCCCCGAAGGAGACCTCTTAGATCTCGAACCTTACGAGGGAATGGAATTCGAATCTGAGGAAGCTGCGAAGGCCTTCTACAATTCCTACGCTCGTCGCGTTGGGTTCAGTACACGTGTCAGCTCATCGCGTCGTTCGAGGCGCGACGGCGCTATCATACAGAGGCAATTCGTTTGCGCCAAGGAAGGTTTCCGCAACTTGAATGAGAAGCGAACCAAGGACAGAGAGATCAAGCGTCCAAGAACAATTACAAGAGTTGGATGCAAAGCGTCTTTGTCTGTGAAAATGCAAGATTCTGGTAAATGGATCGTGTCAGGGTTTGTTCGAGAACATAATCATGAACTTGTTCCGCCAGATCAGGTGCATTGCCTTCGATCTCATAGGCAAATTTCAGGAGCTGCGAAGACGCTGATTGATACTTTACAAGCGGCTGGGATGGGTCCACGGAGGATTATGTCAGCGCTGATTAAAGAGTATGGTGGGATTAGCAAAGTTGGATTCACAGAGGTTGATTGTAGGAATTACATGAGGAATAATCGGCAGAGAAGTTTGGAAGGGGATATTCAAATTGTTGTGGATTATTTGAGACAAATGCATGAGGAAAACCCTAATTTCTTCTATGCTGTTCAAGGTGATGATGATCAGTCTATAAATAATATTTTCTGGGCTGATTCTAAGGCAAGGATGAATTATACTTTTTTTGGTGATACTGTAACTTTTGACACTACTTATAGATCTAATAGGTATCGGTTACCGTTTGCTCCCTTTACTGGTGTGAACCATCATGGACACCCTGTTCTGTTTGGTTGTGCTTTCTTGATTAATGAATCTGAGGCATCATTTGTGTGGCTTTTCAAGACTTGGCTTATGGCCATGTCTGGACGCCCTCCGGTATCGATAACGACTGATCATGATTCTGTGATTCGGTCTGCTGTAATGCAAGTGTTCCCTGAGACGCGACATCGGTTCTGCAAGTGGCACATCTTTAAGAAATGCCAGGAGAAGTTGTCTCATATTTTCCTCAAACATCCGAGTTTTGAAGCTGAGTTTCACAAATGTGTTAACTTGACTGAGTCGATTGAGGAATTTGAATCTTGCTGGTCAACACTTTTGGATAGATATGATCTCAGGGACCATGAATGGCTTCAAGCAATATATTCTGCTTGCAGGCAGTGGGTACCTGTGTATTTGCGAGACACGTTTTTTGCAGAGATGTCCATCACTCAGCGAAGTGATAGCATGAACTCTTACTTTGATGGGTATGTAAATGCTTCAACCAATTTAAATCAGTTCTTTAAGCTGTATGAGAAAGCACTGGAGAGTCGCAATGAGAAAGAAGTAAGAGCAGATTATGACACAATGAATACTTTGCCAGTATTAAGGACTCCATCTCCAATGGAAAAGCAAGCATCTGAGCTTTACACCCGAAAAATTTTCATCAGGTTCCAAGAGGAGTTAGTTGGGACACTAACACTCATGGCATCCAAAGCTGAGGATGATGGGGATGTCATTACATATCATGTAGCTAAATATGGAGAGGACCATAAAGCATACGACGTTAAATTCAATGTTTTGGAGATGAAAGTAACTTGTAGTTGCCAAATGTTTGAGTTTTCGGGCCTTCTTTGCAGACATGTTTTGGCAGTCTTTAGAGTTACCAATGTGCTTACTCTTCCATCTCATTATATATTGAAACGTTGGACAAGAAATGCCAAGAGCAATGTAATATTAGAAGAACATTCCTGTGATGTATATACTTACTATTTGGAATCTCATACAATTAGATATAATACCCTTCGACATGAAGCCTTCAAATTTGTTGATGAAGGTGCAAAGTTTCCTGAAACTTATGATGTTGCAATGGGTGCTTTACAAGAAGCTGCAAAAAGAGTTGCTCAGGCAATGCAAAACGAGGGAAAAAATCCCATTAGCAATGGAAAGGTTAGGAGTCACTTGCTAAATGATGAAAGTCATGCCAAGTACACAAGTGGATGCCAGGAAGAAAGCTTGGACCAGCATATGTCTGAGGATGATATGGATAAGAATATTAGAAAACTTATGAATGAGCTTGACTGCGCAAATCGAAAGTGTGAAGTTTACCGGTCCAACCTGCTCTCAGTTTTGAAAGCTGTTGAGGATCACAAGTTAGAGTTGTCTGTTAAGGTGGAAAACATCAAGATAAGCATGAAAGATGGCCTCTAA 2358 0.4169 MDNEVLEFDIGIGGGDGEYDDDGGDIEHPIDEDELADSSGGVGGGAIGGELYFPEGDLLDLEPYEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSLEGDIQIVVDYLRQMHEENPNFFYAVQGDDDQSINNIFWADSKARMNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGHPVLFGCAFLINESEASFVWLFKTWLMAMSGRPPVSITTDHDSVIRSAVMQVFPETRHRFCKWHIFKKCQEKLSHIFLKHPSFEAEFHKCVNLTESIEEFESCWSTLLDRYDLRDHEWLQAIYSACRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYVNASTNLNQFFKLYEKALESRNEKEVRADYDTMNTLPVLRTPSPMEKQASELYTRKIFIRFQEELVGTLTLMASKAEDDGDVITYHVAKYGEDHKAYDVKFNVLEMKVTCSCQMFEFSGLLCRHVLAVFRVTNVLTLPSHYILKRWTRNAKSNVILEEHSCDVYTYYLESHTIRYNTLRHEAFKFVDEGAKFPETYDVAMGALQEAAKRVAQAMQNEGKNPISNGKVRSHLLNDESHAKYTSGCQEESLDQHMSEDDMDKNIRKLMNELDCANRKCEVYRSNLLSVLKAVEDHKLELSVKVENIKISMKDGL 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2722g00030 785 Coils Coil 728 755 - -
Gabi2722g00030 785 MobiDBLite consensus disorder prediction 11 41 - -
Gabi2722g00030 785 Pfam FAR1 DNA-binding domain 78 169 IPR004330 -
Gabi2722g00030 785 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 685 IPR031052 GO:0006355
Gabi2722g00030 785 ProSiteProfiles Zinc finger SWIM-type profile. 570 606 IPR007527 GO:0008270
Gabi2722g00030 785 MobiDBLite consensus disorder prediction 14 32 - -
Gabi2722g00030 785 Pfam MULE transposase domain 290 383 IPR018289 -
Gabi2722g00030 785 Pfam SWIM zinc finger 558 604 IPR007527 GO:0008270
Gabi2722g00030 785 SMART 26again6 581 608 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2722g00030 Gabi-Chr2722 279131 284562 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2722g00030 MULE 2.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2722g00030 - - gmx:100793442 1415.98