Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2722g00022 ATGTATTCCAAGAGAGAGAACAAGGAGGATGGCAACGCAGAGCATCCTTATGAGGAAATGGACCCTACTGGTCGATATGGCAGGTTTGGAGATGTTCTTGGAAAAGGGGCGATGAAGACAGTGTACAAAGCAATTGATGAGGTCCTTGGATTAGAGGTAGCATGGAACCAGGTCAGACTCAGTGAGGCACTTCGCACACCGGAAGATTTGCAGCGGCTTTACTCAGAGGTTCATCTCCTCGGTACCCTCAAGCACCAGTCCATCATACGGTTCTACACCTCTTGGATTGATGTTGATAACAAGGCCTTCAACTTTGTTACAGAAATGTTCACATCTGGATCGCTGAGAGAATACAGGAAGAAATATAAGAGAGTCAGCATACAAGCAATTAAGAGTTGGGCTCGCCAAATCTTACAGGGTCTAGTTTATCTACATGGTCATGATCCACCAGTAATCCATAGGGACCTCAAATGTGATAACATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGACTAGCTGCATTTCTCCGTGGTTCCCAGTCAGCCCACAGTGTTATAGGCACCCCGGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTTGCTGATGTTTACTCATTTGGCATGTGTGTATTGGAAATGCTTACATCTGACTATCCATACAGTGAATGTTCTAATCCAGCACAAATCTACAAGAAAGTGACATCGGGGAAGCTACCAATGGCACTTTTCCGGATTGAAGACATGGAAGCGCGGAAGTTTATTGCAAAATGCCTAGTACCTGCAGCAAACAGACCATCGGCAAAGGATTTGTTGCTTGAACCTTTTCTTGTGTCTGATGATTCGTCATCAACAATAAAGTTTGGTATTCAGAAGCCTTTTTTGAATGACAATGAGATGGAAAAATTGCAATTGAGTGATCATTTTCCTAGGACTGGAATGAAAATAATAGGGAAGCTGAATCCTGAAGATAATGCTATCTTTCTCAAAGTTCAAATTTCTGATAAGGATGGTTCTGTTAGGAATGTATTTTTTCCCTTTGACATTTTCACTGACACCCCCATTGATGTTGCAATGGAGATGGTAAAAGAACTAGAGATTTCTGATTGGGAGCCTTTGGAAATTGCACATATGATTGATGGAGAGATATCTGCTCTGCTACCTCGTAGGAGGCAAAGAAACTGTTCAGATGCCTTCCACACATTCAGTTATCCAGATGATGATGATGAATCTCATCATCGATTCTGCTCCCTCTCTTCAAGTTCATCATTCCAAGAATCAATATTAGATTTAGTCAGTAAACCTGAGGAAGCATCAAATGGATATTATTGGCTCCATGCTATTATTGTTGCAGATGATTTGCTTGATGATACCAGTTCACGATGCTCTTCACAAGGGACATATTCCAACTTGAATTACTATTCTGTGGATGACCAGGACTACAATGTGGCTTCAATCAGAAAGGATAAACTTCCCATCATAAGGTGTCACAGGAACACAAGGTTTTCCCCCAGTGAAGACTTAAGCAATTGCCACCAGAGTAAAGCTTTAGTAGGATCGCATGATTCTACTAGTAAAAGTAAGATAATGATAGACAATCGTAGACTGACAAGGAACAGATCGTTAATTGATATACGGAGCCAATTATTACACCGATCACTGGTTGAGGAGGTAAACAAAAGACGGTTATTCAATACAGTTGGTGCAGTGGAAGATATTGGATTTCAGACACCTTGTGATGTTTCCAGAAAAAAGTCACAGCCTGTATGTGTTGCTTTAAATGATAACTCTTCAAAGGATGGCAAGGGAGAAAAACTGAAGACGTAA 1851 0.4122 MYSKRENKEDGNAEHPYEEMDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGLEVAWNQVRLSEALRTPEDLQRLYSEVHLLGTLKHQSIIRFYTSWIDVDNKAFNFVTEMFTSGSLREYRKKYKRVSIQAIKSWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAFLRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPMALFRIEDMEARKFIAKCLVPAANRPSAKDLLLEPFLVSDDSSSTIKFGIQKPFLNDNEMEKLQLSDHFPRTGMKIIGKLNPEDNAIFLKVQISDKDGSVRNVFFPFDIFTDTPIDVAMEMVKELEISDWEPLEIAHMIDGEISALLPRRRQRNCSDAFHTFSYPDDDDESHHRFCSLSSSSSFQESILDLVSKPEEASNGYYWLHAIIVADDLLDDTSSRCSSQGTYSNLNYYSVDDQDYNVASIRKDKLPIIRCHRNTRFSPSEDLSNCHQSKALVGSHDSTSKSKIMIDNRRLTRNRSLIDIRSQLLHRSLVEEVNKRRLFNTVGAVEDIGFQTPCDVSRKKSQPVCVALNDNSSKDGKGEKLKT 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2722g00022 616 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2722g00022 616 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Gabi2722g00022 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Gabi2722g00022 616 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Gabi2722g00022 616 CDD STKc_WNK 25 285 - -
Gabi2722g00022 616 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Gabi2722g00022 616 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2722g00022 616 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2722g00022 616 SUPERFAMILY Protein kinase-like (PK-like) 28 308 IPR011009 -
Gabi2722g00022 616 MobiDBLite consensus disorder prediction 1 22 - -
Gabi2722g00022 616 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 472 - -
Gabi2722g00022 616 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2722g00022 Gabi-Chr2722 181434 185701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2722g00022 17 592 MAP Kinase Kinase Kinase AT5G58350 60.377 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi2722g00022 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2722g00022 K08867 - gmx:100272203 937.947