Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2722g00020 ATGGGTAACAACAAGTTCAAATTGTCAGATATGATACCAAATGCTTGGTTTTACAAGCTGAAAGATATGAGCAGATCAAGGAAGAGAAATGGTTCTCATGTTATGAAGAGTAAAGTGTCCTCACCAACAACATCCCAAAGGTCGCTGTCAAGATATTCACATTATTTCTCCACTGAACCAACCAGAGCTGGTAAGCTATACAACACACCAATTCACACCAAAGACTTGGACATACCATTCACTGATTCACCAAGAAGGTCATCCAAAAGAAGGGCTAGGAGAAAAACCATTTACAAGCCTTCTCCCAATGTTGTCTCTTCCTCTTTCGTAGCCAGTTCTAGCTATGATTCCACAAATAATTGGACTAAGCCATATCAAATTCAGTCACCAGACTATGATGTGTCTTCCATTGAAAGTTCTTCTGAATCTGATCACCATGAATATGTCTATTCTGAGTCTGAGTGTGATAGCTTTTCTGTTCCTGACTTGCTTAATGGAATAGCCTCTAATTGCAGTTGCAGAGTTAGCTCTTCAACTAATGACATCATCATTGACATGAACAATGAAACCTTCCCTGGGAATTCTGAAAAGCTGGATGGCTTTGATACAATTTCACAGCTAGGTCTTGCTCCAATATTGACAAAGCCAATGAAGTTTGATGATAAGGTTATTGAAGCCACTGAGTTGAGAAGTTCAACTGAATTGGATGAGCTGCATGCTGATCAGTCTTTCTCCATCAAAATTAGCAAAGAGGAAAGTAGTAGAACTCAAAGAAGGCGAAAAAGCAGTCATATAGCTCGGAAGCCCTCTTCTAATTCAACAGGCATAAAGCTTAGAGTCAATTCTCCAAAACTAGCAAGCAGAAAAATTCAAGCCTGTGCAAGAAGGAGTGTATCATCCAGTGCTAGCAAAGCTTCAAGGAATACAGACTTTCCAGATGGCTTTGCTGTTGTCAAGTCCTCATATGATCCACAGAGTGACTTCAAGGAGTCAATGGTGGAGATGATTGTGGAGAACAACATTCGGGCATCAAAAGATTTAGAGGACTTACTTGCCCGCTATCTTTCCCTGAATTCAAGGGAATACCATGATCTCATTGTTAAAGCATTTGAACAAATTTGGTTTGACATGGCTCAGCTCAGAATGTAA 1149 0.3995 MGNNKFKLSDMIPNAWFYKLKDMSRSRKRNGSHVMKSKVSSPTTSQRSLSRYSHYFSTEPTRAGKLYNTPIHTKDLDIPFTDSPRRSSKRRARRKTIYKPSPNVVSSSFVASSSYDSTNNWTKPYQIQSPDYDVSSIESSSESDHHEYVYSESECDSFSVPDLLNGIASNCSCRVSSSTNDIIIDMNNETFPGNSEKLDGFDTISQLGLAPILTKPMKFDDKVIEATELRSSTELDELHADQSFSIKISKEESSRTQRRRKSSHIARKPSSNSTGIKLRVNSPKLASRKIQACARRSVSSSASKASRNTDFPDGFAVVKSSYDPQSDFKESMVEMIVENNIRASKDLEDLLARYLSLNSREYHDLIVKAFEQIWFDMAQLRM 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2722g00020 382 ProSiteProfiles OVATE domain profile. 317 376 IPR006458 -
Gabi2722g00020 382 MobiDBLite consensus disorder prediction 27 53 - -
Gabi2722g00020 382 Pfam Transcriptional repressor, ovate 321 377 IPR006458 -
Gabi2722g00020 382 MobiDBLite consensus disorder prediction 35 53 - -
Gabi2722g00020 382 MobiDBLite consensus disorder prediction 247 277 - -
Gabi2722g00020 382 Pfam DNA-binding domain 1 47 IPR025830 GO:0003677
Gabi2722g00020 382 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 114 377 IPR038933 GO:0045892
Gabi2722g00020 382 NCBIfam uncharacterized plant-specific domain TIGR01568 315 377 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2722g00020 Gabi-Chr2722 176556 177919 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi2722g00020 Ovate 9.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2722g00020 - - gmx:100780926 592.808