Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2722g00013 ATGGAGAATACATCAAATACCTTGATGCAAAGATATGAATTAGGAAGATTACTAGGCAAAGGCACGTTTGCAAAGGTTTACTATGGACGGAGTGCAATAACTAACCAGAGTGTGGCTATTAAAGTGATTGACAAGGATAAGGTTTTCAGAACTGGGCTAGCTGATCATATCATAAGGGAAATATCTGTTATGCGACTGGTGAAACATCCAAATATTATACAGATTTTTGAGGTCATGGCCACCAAGAAAAATATTTACTATGTTATGGAATATGCTAAAGGTGGCGAGCTTTTTAAAAAGGTGGCCAAAGGAAAACTCAAAGAAGATGTTGCACACAAGTATTTTAAGCAGCTAGTTAATGCAGTGGATTTTTGTCACAGTAGAGGGGTTTACCATAGAGATATAAAGCCAGAGAACCTTCTATTGGATGAAAATGAGAACCTAAAGGTCACAGATTTTGGGTTAAGTGCTCTGGCTGAGTCCAAACGGCAGGATGGTTTGCTTCATACAACTTGTGGAACACCAGCCTATGTTGCTCCTGAAGTCTTCAAAAGGAAGGGTTATGATGGTGCCAAAGCTGATGTTTGGTCTTGTGGTGTAGTTTTGTTTGTCTTACTTGCAGGTTACCTTCCTTTTCGTGACTCAAATTTGATGGAGATGTATAGGAAGATAAACAAAGCAGAGTTTGCATGTCCTAATTGGTTCCCAAGAGAAGTCAGGAAGCTATTGTGCAAGATTTTGGATCCTAATCCTAACACTAGGATTTCCTTACCTAGGATTCAGCAGTGTTCTTGGTTTAAGAAAGGGCCAAATGGTAAACAGAAAAAGCATGAAGTGGAAAACAAGACAATCTCTCCTAAAAGGGAAGCAAGATTTACTTCAAGAAAATCTGCAACAGTCATTATATCCAGACTGGAGGAAATTGCAAAGAGATTGAAGCTGAAAATAAAGAAAAAAGCTTCAGGTTTGTTGAAACTAGAGGGCCTTGATGAAGGTAGGAAGGGGATTTTATCCATTGATGCAGAGATCTTTGAGGTTAATCCATTTCTCCATTTGGTAGAGGTGAAAAAATCAAATGGAGATACATTGGAATATCAGAAAATATTAAAAGAGGATATAAGGCCAGCTCTTCAAGATATTGTTTGGGTTTGGCAAGGTGACCAACAAGAACAATTACAACAATCGGAGCAGATACATGACCTGCAGCAACAACATTCGCAATCATAA 1227 0.3847 MENTSNTLMQRYELGRLLGKGTFAKVYYGRSAITNQSVAIKVIDKDKVFRTGLADHIIREISVMRLVKHPNIIQIFEVMATKKNIYYVMEYAKGGELFKKVAKGKLKEDVAHKYFKQLVNAVDFCHSRGVYHRDIKPENLLLDENENLKVTDFGLSALAESKRQDGLLHTTCGTPAYVAPEVFKRKGYDGAKADVWSCGVVLFVLLAGYLPFRDSNLMEMYRKINKAEFACPNWFPREVRKLLCKILDPNPNTRISLPRIQQCSWFKKGPNGKQKKHEVENKTISPKREARFTSRKSATVIISRLEEIAKRLKLKIKKKASGLLKLEGLDEGRKGILSIDAEIFEVNPFLHLVEVKKSNGDTLEYQKILKEDIRPALQDIVWVWQGDQQEQLQQSEQIHDLQQQHSQS 408
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi2722g00013 408 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2722g00013 408 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Gabi2722g00013 408 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Gabi2722g00013 408 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2722g00013 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Gabi2722g00013 408 Gene3D Transferase(Phosphotransferase) domain 1 94 271 - -
Gabi2722g00013 408 Gene3D Kinase associated domain 1, KA1 273 383 - -
Gabi2722g00013 408 Pfam NAF domain 289 318 IPR004041 GO:0007165
Gabi2722g00013 408 FunFam Non-specific serine/threonine protein kinase 279 382 - -
Gabi2722g00013 408 CDD CIPK_C 285 378 - -
Gabi2722g00013 408 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 377 - -
Gabi2722g00013 408 SUPERFAMILY Protein kinase-like (PK-like) 8 280 IPR011009 -
Gabi2722g00013 408 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Gabi2722g00013 408 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2722g00013 408 FunFam Non-specific serine/threonine protein kinase 5 300 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi2722g00013 Gabi-Chr2722 111933 113871 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2722g00013 1 390 CBL-interacting serine-threonine protein kinases AT5G58380 62.693 0.0 580
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi2722g00013 Pkinase 5.2e-73 CL0016