Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2722g00012 ATGGAGAATACATCAAATACCTTGATGCAAAGATATGAATTAGGAAGATTACTAGGCAAAGGCACGTTTGCAAAGGTTTACTATGGACGGAGTGCAATAACTAACCAGAGTGTGGCTATTAAAGTGATTGACAAGGATAAGGTTTTCAGAACTGGGCTAGCTGATCATATCATAAGGGAAATATCTGTTATGCGACTGGTGAAACATCCAAATATTATACAGATTTTTGAGGTCATGGCCACCAAGAAAAATATTTACTATGTTATGGAATATGCTAAAGGTGGCGAGCTTTTTAAAAAGGTGGCCAAAGGAAAACTCAAAGAAGATGTTGCACACAAGTATTTTAAGCAGCTAGTTAATGCAGTGGATTTTTGTCACAGTAGAGGGGTTTACCATAGAGATATAAAGCCAGAGAACCTTCTATTGGATGAAAATGAGAACCTAAAGGTCACAGATTTTGGGTTAAGTGCTCTGGCTGAGTCCAAACGGCAGGATGGTTTGCTTCATACAACTTGTGGAACACCAGCCTATGTTGCTCCTGAAGTCTTCAAAAGGAAGGGTTATGATGGTGCCAAAGCTGATGTTTGGTCTTGTGGTGTAGTTTTGTTTGTCTTACTTGCAGGTTACCTTCCTTTTCGTGACTCAAATTTGATGGAGATGTATAGGAAGATAAACAAAGCAGAGTTTGCATGTCCTAATTGGTTCCCAAGAGAAGTCAGGAAGCTATTGTGCAAGATTTTGGATCCTAATCCTAACACTAGGATTTCCTTACCTAGGATTCAGCAGTGTTCTTGGTTTAAGAAAGGGCCAAATGGTAAACAGAAAAAGCATGAAGTGGAAAACAAGACAATCTCTCCTGTAGTTACAAATCATTGTGAGCAAAGTGATGGTGTTGCAGCTGAAGCAAGACAAGAATCAGTTACACCAGTAAGTATAAATGCCTTTGATATCATCTCCCTTTCCTCTGGCTTTAATCTTTGTGGATTATTTGAAGACAGTTTTCAGAAAAGGGAAGCAAGATTTACTTCAAGAAAATCTGCAACAGTCATTATATCCAGACTGGAGGAAATTGCAAAGAGATTGAAGCTGAAAATAAAGAAAAAAGCTTCAGGTTTGTTGAAACTAGAGGGCCTTGATGAAGGTAGGAAGGGGATTTTATCCATTGATGCAGAGATCTTTGAGGTTAATCCATTTCTCCATTTGGTAGAGGTGAAAAAATCAAATGGAGATACATTGGAATATCAGAAAATATTAAAAGAGGATATAAGGCCAGCTCTTCAAGATATTGTTTGGGTTTGGCAAGGTGACCAACAAGAACAATTACAACAATCGGAGCAGATACATGACCTGCAGCAACAACATTCGCAATCATAA 1374 0.3836 MENTSNTLMQRYELGRLLGKGTFAKVYYGRSAITNQSVAIKVIDKDKVFRTGLADHIIREISVMRLVKHPNIIQIFEVMATKKNIYYVMEYAKGGELFKKVAKGKLKEDVAHKYFKQLVNAVDFCHSRGVYHRDIKPENLLLDENENLKVTDFGLSALAESKRQDGLLHTTCGTPAYVAPEVFKRKGYDGAKADVWSCGVVLFVLLAGYLPFRDSNLMEMYRKINKAEFACPNWFPREVRKLLCKILDPNPNTRISLPRIQQCSWFKKGPNGKQKKHEVENKTISPVVTNHCEQSDGVAAEARQESVTPVSINAFDIISLSSGFNLCGLFEDSFQKREARFTSRKSATVIISRLEEIAKRLKLKIKKKASGLLKLEGLDEGRKGILSIDAEIFEVNPFLHLVEVKKSNGDTLEYQKILKEDIRPALQDIVWVWQGDQQEQLQQSEQIHDLQQQHSQS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2722g00012 457 FunFam Non-specific serine/threonine protein kinase 307 431 - -
Gabi2722g00012 457 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Gabi2722g00012 457 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2722g00012 457 Pfam NAF domain 309 367 IPR004041 GO:0007165
Gabi2722g00012 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Gabi2722g00012 457 Gene3D Transferase(Phosphotransferase) domain 1 94 287 - -
Gabi2722g00012 457 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2722g00012 457 CDD CIPK_C 313 427 - -
Gabi2722g00012 457 FunFam Non-specific serine/threonine protein kinase 5 306 - -
Gabi2722g00012 457 Gene3D Kinase associated domain 1, KA1 307 432 - -
Gabi2722g00012 457 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Gabi2722g00012 457 SUPERFAMILY Protein kinase-like (PK-like) 8 292 IPR011009 -
Gabi2722g00012 457 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Gabi2722g00012 457 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Gabi2722g00012 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 426 - -
Gabi2722g00012 457 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2722g00012 Gabi-Chr2722 111783 113871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2722g00012 1 439 CBL-interacting serine-threonine protein kinases AT5G58380 67.181 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi2722g00012 Pkinase 7.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2722g00012 - K07198 gmx:100779316 705.671