Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2722g00010 ATGTTTGGATGTCCAGAGACAGTTTTGTTTTTTGCCAAAGAAAGATTAGATGAGATAGCAAAGGTCAGAACAGAGGGAGAAGCATCTTCTCAAATGGGAAGAAAGCATTTTTATGGTCCAGCTTTAGGGACAACCTTAAACACAGTAACCCCTTGTGCTGCATGTAAGCTTTTGAGAAGAAGGTGTGCTGAAGAATGTCCTTTCTCTCCTTATTTCTCACCACATGAGCCTCAAAAGTTTGCAGCTGTTCATAAAGTGTTTGGTGCAAGCAATGTCTCTAAGATGCTAATGGAGGTACCAGAGGGCCAAAGAGCTGATGCAGCAAATAGTCTTGTTTATGAAGCTAACTTGAGGTTGAGAGATCCTGTATACGGATGCATGGGTGCAATATCAGCTTTGCAGCAACATGTTCAATCTTTACAAGCACAACTAAATGCAGTAAGGGATGAGATACTAAAATACAAATATAGAGAGGCTGCTACTCTTCTTTCTTCTCATGCTGCTTTGGTTTCTTCTGCTGATGCAGCAATTCCTGCAGGTTCACAAGGTCTTTCTCAACCTCCTCCTCCTCCTCCACCACCAAAACCATTACCTTCTCCTCCTGTTGTTCTTTCATCCTTGTCTTCATCTTCAACTTCTGTATACACTACATCTAAAAGCACAATGAGCCATGGATCCATTTCCAGTGAAAATGTTCCATACTTTGTTTAG 711 0.4135 MFGCPETVLFFAKERLDEIAKVRTEGEASSQMGRKHFYGPALGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQHVQSLQAQLNAVRDEILKYKYREAATLLSSHAALVSSADAAIPAGSQGLSQPPPPPPPPKPLPSPPVVLSSLSSSSTSVYTTSKSTMSHGSISSENVPYFV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2722g00010 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 47 196 - -
Gabi2722g00010 236 ProSiteProfiles LOB domain profile. 50 151 IPR004883 -
Gabi2722g00010 236 MobiDBLite consensus disorder prediction 183 201 - -
Gabi2722g00010 236 Coils Coil 130 157 - -
Gabi2722g00010 236 MobiDBLite consensus disorder prediction 178 236 - -
Gabi2722g00010 236 MobiDBLite consensus disorder prediction 202 230 - -
Gabi2722g00010 236 Pfam Lateral organ boundaries (LOB) domain 51 147 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2722g00010 Gabi-Chr2722 83087 84134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2722g00010 32 164 AS2 family AT2G30340 80.597 5.14e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi2722g00010 LOB 1.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2722g00010 - - gmx:100778248 291.582