Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2722g00006 ATGGCACTTTCTTCTTCTCCATCTTCTTCTTTCTCATCATCTTCAGCAGCCATGTTTGCTTTAGCTTTTTTCATGCTTTTGCTTGCAGGGAGTTCTTCGGCTCAACTCTCTGAGAACTTCTATGTTAAGAAGTGTCCAAAGGTTTTTAACGCTGTAAAATCTGTTGTTCAATCTGCTGTGGCTAAAGAACCTCGCATGGGAGCATCTCTCCTTCGAGTCTTCTTTCATGATTGCTTTGTCAATGGTTGTGATGGATCAGTACTACTTGATGACACTTCCTCCTTCAAAGGAGAGAAGACTGCACCTCCCAACAAAAATTCTTTGAGAGGTTATGAAGTCATTGATGCCATAAAGTCTAAGGTGGAGGCAGCATGCCCCGGTGTGGTGTCATGTGCTGATATTGTAGCCATTGCTGCTCGTGACTCTGTTGCAATTCTTGGAGGACCTTATTGGAAGGTTAAACTTGGTAGAAGGGATTCCAAGACAGCCAGTTTCAATGATGCAGGAAGTGGTGTAATTCCACCTCCCTTTTCTACCCTTAGCAACCTTATCTCAAGGTTTCAAGCTCAAGGACTCTCTACCAAGGACATGGTTGCCTTATCTGGAGCCCACACAATTGGGAAGGCAAGATGTGCTACTTACAAAGATCGCATATACAATGACACAAACATAAACAGTTTATTTGCTACGTCAAGGAAGAGGAACTGTCCAAGGAAAAGTGGGTCAGAAAGAGACAACAATGTAGCATACCTAGACTTCAAAACTCCAAACCATTTTGATAACTACTACTACAAGAACCTTATCAACAAAAAGGGACTCCTTCATTCAGACCAGGTGCTCTTCAGCGGAGGATCTACTGATTCAATTGTTGCAGCTTACAGCAATAATCAGAAGGCCTTCGAGTCTGATTTTGTTAGAGCAATGATTAAGATGGGAAACATCAAACCTTTAACTGGGTCTAAAGGGGAGATTAGGAAGCACTGTGGGAGAGTCAATTAG 999 0.4254 MALSSSPSSSFSSSSAAMFALAFFMLLLAGSSSAQLSENFYVKKCPKVFNAVKSVVQSAVAKEPRMGASLLRVFFHDCFVNGCDGSVLLDDTSSFKGEKTAPPNKNSLRGYEVIDAIKSKVEAACPGVVSCADIVAIAARDSVAILGGPYWKVKLGRRDSKTASFNDAGSGVIPPPFSTLSNLISRFQAQGLSTKDMVALSGAHTIGKARCATYKDRIYNDTNINSLFATSRKRNCPRKSGSERDNNVAYLDFKTPNHFDNYYYKNLINKKGLLHSDQVLFSGGSTDSIVAAYSNNQKAFESDFVRAMIKMGNIKPLTGSKGEIRKHCGRVN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2722g00006 332 ProSiteProfiles Plant heme peroxidase family profile. 35 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PANTHER PEROXIDASE 72-RELATED 33 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 CDD secretory_peroxidase 35 331 IPR033905 GO:0004601|GO:0042744
Gabi2722g00006 332 Pfam Peroxidase 52 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 FunFam Peroxidase 39 175 - -
Gabi2722g00006 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Gabi2722g00006 332 FunFam Peroxidase 174 311 - -
Gabi2722g00006 332 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Gabi2722g00006 332 Gene3D - 39 328 - -
Gabi2722g00006 332 Gene3D Peroxidase, domain 2 174 311 - -
Gabi2722g00006 332 SUPERFAMILY Heme-dependent peroxidases 35 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00006 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2722g00006 Gabi-Chr2722 48664 52497 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2722g00006 13 332 Peroxidase AT5G58400 63.750 3.52e-150 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2722g00006 K00430 - gmx:100812478 481.485