Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2722g00001 ATGGATTCTCATCATCTCCAATCTTTCTTTGTGCTTGTTATGGTCACTTTGTCAACATTTCTGATCCCTACCCTTGCAACCCTGACTCCTGATTATTATGACACAGTTTGCCCTCAGGCATTGCCAATCATAAAGGCAGTTGTTAAGCAGGCAATTATTCGTGAAAGACGCATAGGAGCATCCTTACTGCGCTTGCATTTCCATGACTGCTTTGTTAATGGCTGTGATGGATCAGTTCTGCTAGATGACACCCCTTTCTTCATTGGAGAGAAGACTGCACTTCCAAATAACAATTCAATTAGAGGTTTTGACGTGGTTGATGAAATTAAAGCAGTTGTTGACAGAGTTTGCAAACGTCCTGTGGTATCATGTGCTGATATCTTAGCTATAGCAGCGCGTGATTCTGTTGCCATATTGGGAGGTACACAATATTGGTACAAGGTGTTATTAGGAAGAAGAGATGCAAGAAATGCAAGCAGGGATGCTGCAAATCTCAATCTTCCTGCCCCTTTTCTCAACATCTCACAGCTTATTTCTAATTTTCAGTCTCATGGGCTAGACCTTAAAGACCTAGTGGTCCTATCTGGTGGCCACACTATTGGATTTGCCAGGTGCAGTTCCTTTCAGGACAGGATCTTCAATGACACAAACATAGACCAAAAATTTGCAGCCACTTTGCGTAAGACATGTCCTCTAGGTGGTGACAACAACAATTTAGCACCACTGGATGCGAGTACTCCTGCTAGAGTTGACACCTCATACTATACAAATTTGTTATATGGAAAGGGTCTGCTTCATTCTGATCAGGAGCTCTATAAGGGTGATGGTTGTGGTGAAAGTGACAGATTGGTTCAGCTATACAGCAACGACCCTTATGCTTTTGCCAGAGACTTTGGAGATTCCATGATCAAGATGGGTAACATGAAGCCTCTTACTGGGACAATGGGAGAGGTAAGGTGTAATTGCAGAAGAGTCAACTAG 981 0.4281 MDSHHLQSFFVLVMVTLSTFLIPTLATLTPDYYDTVCPQALPIIKAVVKQAIIRERRIGASLLRLHFHDCFVNGCDGSVLLDDTPFFIGEKTALPNNNSIRGFDVVDEIKAVVDRVCKRPVVSCADILAIAARDSVAILGGTQYWYKVLLGRRDARNASRDAANLNLPAPFLNISQLISNFQSHGLDLKDLVVLSGGHTIGFARCSSFQDRIFNDTNIDQKFAATLRKTCPLGGDNNNLAPLDASTPARVDTSYYTNLLYGKGLLHSDQELYKGDGCGESDRLVQLYSNDPYAFARDFGDSMIKMGNMKPLTGTMGEVRCNCRRVN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2722g00001 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 Pfam Peroxidase 45 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 Gene3D Peroxidase, domain 2 168 305 - -
Gabi2722g00001 326 ProSiteProfiles Plant heme peroxidase family profile. 27 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 Gene3D - 31 326 - -
Gabi2722g00001 326 PANTHER PEROXIDASE 72-RELATED 26 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 CDD secretory_peroxidase 28 325 IPR033905 GO:0004601|GO:0042744
Gabi2722g00001 326 FunFam Peroxidase 168 305 - -
Gabi2722g00001 326 SUPERFAMILY Heme-dependent peroxidases 28 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2722g00001 326 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Gabi2722g00001 326 FunFam Peroxidase 31 176 - -
Gabi2722g00001 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2722g00001 Gabi-Chr2722 11466 13123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2722g00001 26 326 Peroxidase AT5G05340 55.446 8.92e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2722g00001 K00430 - gmx:100810852 496.123