Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2720g00001 ATGAGGACCAATGAAGGAGAGATTGTTCAAGTAGAAGGAGGCCACATTGTTCGATCCACAGGTAGAAAAGATAGGCACAGCAAGGTTTGCACTTCCAAAGGTCCTCGTGATCGCAGGGTTAGGCTCTCAGCACACACAGCCATTGAATTCTATGATGTTCAAGATCGTCTTGGCTATGACCGACCCAGCAAAGCTGTGGACTGGCTCATCAAGAAAGCAAAGCCTTCCATTGACAAGCTTGCTGAGCTTCCTCCATGGAATCCAATTGCTGAAACTAATGAAGCTCATGGGGAAGATCAAAACGCAGGCTCAAGTAGCATGGTCATTGGAGAACAACAATCAGAGTCTTCTGGTTACAATTTTCATTTCCAAAACCATTCACCTTTCATTTCACCACACGTTGACACTGACCCTATAGCTTTCTTTCCCACTACCTCTTCTACTTCTTCCTCCATCAATTTTCAAAGCTACCCTCCTGATATTATCTCAAGAACCAACATCTCCACAGAAGATCTTGGTCTGTCTCTTCATTCCTTCCAAGACCACCCTGGTTTGATTCATTGGCAATCACAAGAAGAAGCAGGTGCAAATCAAACACCTTCAAATCAACACCAAACTCTTTTTGCTGGCTCAACTCCAACCGGGTTTGAGAACTATCATCAGAGAACTGTGACTTGGAACAATGAAGCAACTGCGGATCATATAAACAGAATGGGGTTCATGATCAACTCACAGCAGCAATTTCTAGGCCAAGGTTCAGCTTCAGCATATTCTCAAAATGGGACCCTTCAGTCCAGTTTTTCACCTTCAGTTCGTTCTTGGAATGAAATTCCAATGGCTTCCTCAGAGCACCAAAGGTCCCAACCAGTTCATCAACCTTCAATCTTTGGCAGCAGGTTTCTGCCTGATGGATTAGCAGGGTTCTGCATTCCACCTAGAATTCAAGGTGAGGAAGAGAACCATGGAGTTGCTTCATCTTCTGCTTCTGCTAGTTCTCACCACTGA 1005 0.4458 MRTNEGEIVQVEGGHIVRSTGRKDRHSKVCTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPSIDKLAELPPWNPIAETNEAHGEDQNAGSSSMVIGEQQSESSGYNFHFQNHSPFISPHVDTDPIAFFPTTSSTSSSINFQSYPPDIISRTNISTEDLGLSLHSFQDHPGLIHWQSQEEAGANQTPSNQHQTLFAGSTPTGFENYHQRTVTWNNEATADHINRMGFMINSQQQFLGQGSASAYSQNGTLQSSFSPSVRSWNEIPMASSEHQRSQPVHQPSIFGSRFLPDGLAGFCIPPRIQGEEENHGVASSSASASSHH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2720g00001 334 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
Gabi2720g00001 334 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 270 IPR005333 GO:0003700
Gabi2720g00001 334 Pfam TCP family transcription factor 21 119 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2720g00001 Gabi-Chr2720 23128 24187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2720g00001 6 332 TCP Transcription Factor Family AT3G15030 42.105 2.46e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi2720g00001 TCP 5.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2720g00001 - - gmx:100814907 421.779