Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2719g00039 ATGGGGTTCTCAGTAAGACAATTCTTAATCTACAATTTGAATATGAACCCATGGCCTGTTCTATTTGGGATTGTGGTTTTCTCATGCTTTTGGTTGCCAGTTTCAAGTCTCGGTTCCATGTCTTCCATTGCCATCTCTTATGGCGATAAAGGTGCTGTTTTTTGTGGTTTGAAATCTGATGGATCGCATACAGTGACCTGTTATGGATTGAACTCAGCCATAATTTATGGAACACCTTCCCATTTCACATTCCTTGGTCTAACCGCTGGTGATGGCTTTGTCTGTGGGCTTTTAATGAGTTCTAGTCAACCATATTGCTGGGGTAGCAGTAACCATATAGAAATGGGTGTGCCTCAACCTATGGTTAAGGATGCTCAGTACCTAGAAATTAGTGCTGGGGATTATCATGTTTGTGGATTGAGGAAACCCTTGACGGGAAGACACAGGAACACTTCTTTTGTTGATTGTTGGGGCTACAACATGACCAAGAACTATGTGTTTGATGGGCAGATTCAATCAATCTCAGCAGGTTCTGAATTCAATTGTGGCTTATTTTCCCAGAATAGGACTGTGTTCTGCTGGGGAGATGAGACTAGTAGCCAGGTTATTAATTTGATTCCTCAAGGCATGAGATTCCAGAAGGTCTCTGCTGGTGGGTATCATGTGTGTGGAATCTTAGAAGGGGTGAATTCTAGAGCTGTTTGTTGGGGAAGGAGCTTGGATATGGAGGAGGAAATTTCATTGATACATTCAGGACAAGCACAAGGTAAAGTTGATTTGGCTCCAAATGATCCAATGCTTTCTGTAGTGGGAGGAAGGTTCCATGCTTGTGGCATTAAGAGCTATGATCGTGGTGTGATTTGCTGGGGCTATAGTTTAAAAGCAAGCACACCAGTTCCTAGTGAGATTAAGGCATTTGAGATTGCTGCTGGTAATTATTTTACCTGTGGAATACTTGCTGAGAAATCTCTTCTTCCTGTTTGTTGGGGTGTTGGCTTCCCTACCTCTCTACCAGTGGCTGTGTCACCAAGAATGTGCAGGTTTACTCCATGTCCTCCTGGTTACTATGAAATTGACCAGGATCAGCAGAAGAGTCTTTGCAAGTCCCCAGATTCTCACATTTGCATTCCCTGCAGTGGTGTTTGTCCTGATGAAATGTATCAGAAAAGTGGATGCAATTTGAAATCTGACAGAGTATGTGAATATAATTGTTCTATTTGTTCCTCATCGGTATGCTTCTCCAACTGCTCCTCTTCTTATTCCAATGCTGCCACTGGGAAGAAAAATGAAAGATTTTGGTCTCTGCAGTTGCCAGTTGTTATTGTTGAGATAGCTTTTGCAGTTTTGATAGTTATTATTGTATGTATAACCGCAGTTTTGTATGTTCGCTACAAGCTAAGAGATTGTGAATGTTCAGTGAGAGGGTCAAAGGTGAAGAAACTTAACGGGAGTTCTTCACTCCAAAAGGAAAACAGCAAGATCCGCCCGGACTTGGAGGAGTTCAAGTTTAGGAGGGCACAGATGTTCACCTATGAGGAGCTTGAAAGAGCAACTGGTGGATTCAATGAAGAATCCATAGTGGGAAAGGGAAGTTTTTCGTGTGTGTTCAAAGGGGTTCTCAGAGATGGGACTGTTGTTGCTGTTAAAAGGGCCATAATGTCTCCCAACATGCAGAAGAATTCCAAAGAGTTTCACACAGAGCTTGACTTGCTCTCTAGGTTGAACCATGCCCATTTGCTCAATCTTTTAGGCTATTGTGAAGAAGGTGGAGAAAGACTTCTTGTTTATGAGTACATGGCTCATGGTTCTTTGCATCAACATCTCCATGTTAAAAACAAAGAGTTGAAAGAGCAATTGGATTGGGTTAGAAGGGTAACAATTGCAGTCCAAGCAGCTCGTGGAATTGAATATTTGCATGGCTATGCTTGCCCACCTGTGATTCATCGAGACATCAAGTCTTCAAACATCCTCATTGATGAAGAACACAATGCCAGAGTGGCTGATTTTGGTTTGTCATTGCTTGGTCCTGCAGATAGTAGCTCCCCACTAGCTGAGTTACCAGCTGGTACTCTTGGTTATCTTGATCCTGAATACTACAGGCTTCATTATCTCACCACAAAATCTGATGTCTACAGCTTTGGTGTTCTACTTTTGGAAATCTTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATAGTTCAATGGGCAGTGCCTCTTATTAAGTCAGGAGATATAGCTGCAATTCTGGACCCAGTTTTGAAACCTCCTCCTGATCTTGAAGCCTTGAAAAGGATTGCTATTGTGGCTTGTAAAAGTGTGAGAATGAGAGGGAAGGATAGGCCTTCAATGGACAAAGTGACAACAGCTTTGGAGAGAGCTCTTGCACAGTTAATGGGTAGTCCTTGCATTGAGCAGCCAATTTTGCCAACTGAGGTGGTTTTGGGAAGTAACAGATTGCACAAGAAATCATCTCAAAGATCTTCAAACAGGTCAGCTTCAGAAAATGATGTGGCAGAAACTGAGGATCAGAGGTTTGAGTTTAGAGCACCCTCATGGATAACTTTCCCAAGTGTTACTTCTTCTCAAAGGAGAAAGTCATCAGGCTCAGAGGCTGATGTTGATGGGAAAAATGCAGAAGGTAAGAACTTGAGCAACAATGTTGGAGGTGGTGGTGGTGGTGGTGATGTTTTGAGAAGTCTTGAGGAAGAGATTGGTCCTGCATCTCCTCAAGAGAGGCTCTTCTTGCAACACAACTTCTAA 2772 0.4257 MGFSVRQFLIYNLNMNPWPVLFGIVVFSCFWLPVSSLGSMSSIAISYGDKGAVFCGLKSDGSHTVTCYGLNSAIIYGTPSHFTFLGLTAGDGFVCGLLMSSSQPYCWGSSNHIEMGVPQPMVKDAQYLEISAGDYHVCGLRKPLTGRHRNTSFVDCWGYNMTKNYVFDGQIQSISAGSEFNCGLFSQNRTVFCWGDETSSQVINLIPQGMRFQKVSAGGYHVCGILEGVNSRAVCWGRSLDMEEEISLIHSGQAQGKVDLAPNDPMLSVVGGRFHACGIKSYDRGVICWGYSLKASTPVPSEIKAFEIAAGNYFTCGILAEKSLLPVCWGVGFPTSLPVAVSPRMCRFTPCPPGYYEIDQDQQKSLCKSPDSHICIPCSGVCPDEMYQKSGCNLKSDRVCEYNCSICSSSVCFSNCSSSYSNAATGKKNERFWSLQLPVVIVEIAFAVLIVIIVCITAVLYVRYKLRDCECSVRGSKVKKLNGSSSLQKENSKIRPDLEEFKFRRAQMFTYEELERATGGFNEESIVGKGSFSCVFKGVLRDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQHLHVKNKELKEQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVQWAVPLIKSGDIAAILDPVLKPPPDLEALKRIAIVACKSVRMRGKDRPSMDKVTTALERALAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSASENDVAETEDQRFEFRAPSWITFPSVTSSQRRKSSGSEADVDGKNAEGKNLSNNVGGGGGGGDVLRSLEEEIGPASPQERLFLQHNF 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2719g00039 923 MobiDBLite consensus disorder prediction 823 838 - -
Gabi2719g00039 923 Gene3D - 86 347 IPR009091 -
Gabi2719g00039 923 FunFam serine/threonine-protein kinase-like protein CCR1 491 598 - -
Gabi2719g00039 923 Pfam Protein kinase domain 522 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2719g00039 923 Gene3D Transferase(Phosphotransferase) domain 1 599 804 - -
Gabi2719g00039 923 SMART serkin_6 521 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2719g00039 923 MobiDBLite consensus disorder prediction 823 847 - -
Gabi2719g00039 923 MobiDBLite consensus disorder prediction 862 923 - -
Gabi2719g00039 923 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 24 923 - -
Gabi2719g00039 923 FunFam Receptor protein kinase CRINKLY4 599 801 - -
Gabi2719g00039 923 ProSiteProfiles Protein kinase domain profile. 521 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2719g00039 923 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 350 400 IPR001368 GO:0005515
Gabi2719g00039 923 SUPERFAMILY Protein kinase-like (PK-like) 500 794 IPR011009 -
Gabi2719g00039 923 SUPERFAMILY RCC1/BLIP-II 36 291 IPR009091 -
Gabi2719g00039 923 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Gabi2719g00039 923 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 102 143 IPR000408 -
Gabi2719g00039 923 FunFam Serine/threonine-protein kinase-like protein CR4 36 203 - -
Gabi2719g00039 923 Gene3D Phosphorylase Kinase; domain 1 489 598 - -
Gabi2719g00039 923 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Gabi2719g00039 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2719g00039 Gabi-Chr2719 345337 348198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2719g00039 10 923 Receptor kinase-like Gene Family AT3G59420 67.609 0.0 1261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gabi2719g00039 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2719g00039 - - gmx:100809215 1544.25