Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2715g00002 ATGGAGTTCCTGAGTTGTGTACTCCTACTTGTGTTGACATTCACTCTTGCACAAGCTTTGCGTTCTCTGCTTTCAAGAGGCAAAAATGCAAAGTACAAGCTCCCACCAGGACCTTCACCTCTTCCTATAGTGGGAAACCTCCTTGCATTGGGCAAAAAGCCCCACCAATCACTGGCAAAACTTGCTCAAATCTACGGCCCAATAATGTGTCTGAAGTTAGGACAAGTAACAACCATAGTTGTCTCTTCAGCAGAAATGGCCAAAGAGGTTCTTCAAACCCATGATCAGTTCTTGTCAAACCGAGACGTTCCACATGCTGTGGAAGTTTTCAACCACGAAAAGTATAGCATGACCTTCTTGCCTGTTTCACCTCAGTGGCGAGACCTAAGGAAAATATGCAATACTCAGTTATTCTCCAATAAGACTTTGGATGCTAGTCAAGACCTTAGGCGTATGAAACTGCAAGAACTCCTTCATGATATCAATCAAAGCAGCTTAATTAGTGAAGCAGTAGATATTGGAGCAGCAGCTTTCAATACTGTAATCAATTTATTATCAAACACTATTTTCTCTGTAGATTTGTTTGAGTCTGCAGGTTCAGCTGGAGATTTCAAGGAGACAGTGACACATATCATGAAAGAGTGTGGAAAACCTAACTTGGCTGACTTTTACCCTGCGCTGAAAAAGGTTGATCCACAGCGCATTAATAGTCGCAACGGTTTTTACGCTGGAAAGGTCATAGACATCTTCCGCCGTTTGGTTGATCAAAGGTTGAAGCTAAGGGAAGTTCAAAGTGCTGCTGACACACACAATGACATGCTAAATACCTTACTCAACATTGCTCAAGAGAACAGCCAAGAGATGGACAAAACCAAAATTGAACACTTATCCCTGACTCTATTTGTTGCGGGAACGGATCCAGTTACACATACGCTAGAATGGGCAATGGCAGAGTTACTCCAAAATGCACAGGCTATGGAAAAAGCAAAACAAGAGTTGGAGCAAACCATTGGGAAAGGTAAACCTGTTGAGGAATCAGATATTGCCAGGCTTCCTTATTTACAAGCAGTAATAAAGGAGACCTTGAGATTGCACCCTCCTGTCCCACTTTTAATCCCACGGAAAGCCGATGAAAATGTGGAAATTTGTGGCTACACAATCCCAAAAGGTGCAAGGGTGCTAGTTAATGTGTGGGCTATTGGAAGAAATTCAAGTAGTTGGAAAGATGCAAATGTGTTTTCACCAGAAAGGTTCTTAAGCTCTGAAATTGATGTCAAAGGTCGCAATTATGAGCTAACACCATTTGGTTCTGGGCGTCGAGTTTGTCCTGGCTTGCTGTTTGCCATGAGGATGTTGTATTTGATGTTGGGTTCAATACTCAACTGTTTTAATTGGAGACTTGAAGATGGTATGTCAATAGAGGATATGAACATGGACGACAACTTTGGGCTAGCTTTAGCAAAGGCTGAACCCGTCAGAATTATTCCAGAGAAAATTAGCAATTAA 1506 0.4203 MEFLSCVLLLVLTFTLAQALRSLLSRGKNAKYKLPPGPSPLPIVGNLLALGKKPHQSLAKLAQIYGPIMCLKLGQVTTIVVSSAEMAKEVLQTHDQFLSNRDVPHAVEVFNHEKYSMTFLPVSPQWRDLRKICNTQLFSNKTLDASQDLRRMKLQELLHDINQSSLISEAVDIGAAAFNTVINLLSNTIFSVDLFESAGSAGDFKETVTHIMKECGKPNLADFYPALKKVDPQRINSRNGFYAGKVIDIFRRLVDQRLKLREVQSAADTHNDMLNTLLNIAQENSQEMDKTKIEHLSLTLFVAGTDPVTHTLEWAMAELLQNAQAMEKAKQELEQTIGKGKPVEESDIARLPYLQAVIKETLRLHPPVPLLIPRKADENVEICGYTIPKGARVLVNVWAIGRNSSSWKDANVFSPERFLSSEIDVKGRNYELTPFGSGRRVCPGLLFAMRMLYLMLGSILNCFNWRLEDGMSIEDMNMDDNFGLALAKAEPVRIIPEKISN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2715g00002 501 Coils Coil 316 336 - -
Gabi2715g00002 501 Pfam Cytochrome P450 35 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 SUPERFAMILY Cytochrome P450 35 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 CDD CYP76-like 62 496 - -
Gabi2715g00002 501 Gene3D Cytochrome P450 21 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Gabi2715g00002 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 497 - -
Gabi2715g00002 501 FunFam Cytochrome P450 76C4 26 495 - -
Gabi2715g00002 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2715g00002 501 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2715g00002 Gabi-Chr2715 28835 32372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2715g00002 14 498 Cytochrome P450 AT2G45550 46.122 1.74e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2715g00002 - - vvo:131607027 666.766