Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2712g00004 ATGTTTTTGTGCATGATCCCGTGTGCCAAGCCAACCCCCGTTGATGGGGATGAAGATGACCGTGGGAACGGCACGCCGAACACAAAAGATGCCGTCAAGGGTCTGACGTCGCAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGCTGGCACCCCCGAGAGCATCAAGTATGACACCGTTTCTGAAGGGGGGGTTCCATACGGCTACATTGGTGGTGGAAGCGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGGTGGTGGACATGACTGGATCAAACAAGTGGATAATACAGATGGAGCCAGGTGTTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGCCGAGACATGTTTGATAAGCCGCGAGCCCAGAGGTTGTGGGCTGAGAATTACGACAGGATCAGGGAGCTTCATAATATCCAGAATTTAAATCAACATGTTTTCAACACTCCTGCAAGGTCTGATGATGATGAGAACTCGGGGGAATCTGAACAAGATATCCCAATGGCTTCAATGCTGAACACAGATTCGACTACGGGGAATTTCCATGCACCCGCTGGGAATATGGGGTATTTCCATGGTGGGATATCAAGGGCTAACAACCCTACTGACAATGACGTGGATGCTGAATGGGTTGAGCAGGACGATCCTGGAGTGTTAATCACTGTGAAGAGGTCAGCTAATGGGACCAGGCAAATTCGCCGTATCAAATTCAGCCGGGAAATTTTTGATGCAGATGCAGCCAAGGATTGGTGGCTGCGCAACAGGGTTCGAGTTCATGCTCAGTATATGTGA 906 0.5 MFLCMIPCAKPTPVDGDEDDRGNGTPNTKDAVKGLTSQIKDLALKLSGKKIKAGTPESIKYDTVSEGGVPYGYIGGGSASSTPALDYTNPNQSPIGNTTPGGRQPQPPAGSVAVVDMTGSNKWIIQMEPGVHITVVSLPTGGNDLKRIRFCRDMFDKPRAQRLWAENYDRIRELHNIQNLNQHVFNTPARSDDDENSGESEQDIPMASMLNTDSTTGNFHAPAGNMGYFHGGISRANNPTDNDVDAEWVEQDDPGVLITVKRSANGTRQIRRIKFSREIFDADAAKDWWLRNRVRVHAQYM 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2712g00004 301 MobiDBLite consensus disorder prediction 11 31 - -
Gabi2712g00004 301 ProSiteProfiles BRX domain profile. 121 176 IPR013591 -
Gabi2712g00004 301 Pfam Transcription factor regulating root and shoot growth via Pin3 121 175 IPR013591 -
Gabi2712g00004 301 Pfam Transcription factor regulating root and shoot growth via Pin3 246 300 IPR013591 -
Gabi2712g00004 301 MobiDBLite consensus disorder prediction 90 105 - -
Gabi2712g00004 301 MobiDBLite consensus disorder prediction 90 110 - -
Gabi2712g00004 301 PANTHER PROTEIN BREVIS RADIX-LIKE 1 6 300 IPR044532 -
Gabi2712g00004 301 Pfam Transcription factor BRX N-terminal domain 25 48 IPR027988 -
Gabi2712g00004 301 ProSiteProfiles BRX domain profile. 246 301 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2712g00004 Gabi-Chr2712 33634 35667 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2712g00004 5 301 Major Intrinsic Protein MIP AT1G31880 43.353 3.82e-79 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2712g00004 - - jre:109004022 262.692