Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2712g00002 ATGTTTGCTTATTTTGTTGCTGTTCAAGATAAGATGAGCTTTTTAGCGAAGATGTTTTTGTTCATGAATCCGTGTGCCAAGCCAACCCCCGTTGATGGGGATGAAGATGACCATGGGAACGGCACGCCGAACACAAAAGAAGCCGTCAAGGGTCTGTCGTTGCAGATTAAGGATCTGGCGCTGAAGCTTTCATGGAAGAAAATCAAAGCTGGCAACCCCAAGAGCATCAAGTATGACACCGTTTCTGAAGAGGGGGTTCCATACGGCTACATTGGTGGTGGAAGCGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGATGGTGGACGTGACTGGATCCAACAAGTGGATAGCAAAGATGGAGCCAGGTGCTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGCCGAGACATGTTTGATAAGCCGCGAGCCCAGAGGTTGTGGGCTGAGAATTACGACAGGATCAGGGAGCTTCATAATATACATAATTTAAATCAACATGTTTTCAACACTCCTGCAAGGTCTAATGATGATGAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGGTGGCACCTCCGAGAGCATCAAGTATGACACCGTTTCTGAAGGGGGGTTCCACACGGCTACATTGGTGGTGGAAGCGCAAGTTCAACCCTTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAG 858 0.4907 MFAYFVAVQDKMSFLAKMFLFMNPCAKPTPVDGDEDDHGNGTPNTKEAVKGLSLQIKDLALKLSWKKIKAGNPKSIKYDTVSEEGVPYGYIGGGSASSTPALDYTNPNQSPIGNTTPGGRQPQPPAGSVAMVDVTGSNKWIAKMEPGAHITVVSLPTGGNDLKRIRFCRDMFDKPRAQRLWAENYDRIRELHNIHNLNQHVFNTPARSNDDEIKDLALKLSGKKIKGGTSESIKYDTVSEGGFHTATLVVEAQVQPLLWTTQTPINPQLVTPPLEGVNLNHQLVV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2712g00002 285 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Gabi2712g00002 285 Pfam Transcription factor BRX N-terminal domain 42 64 IPR027988 -
Gabi2712g00002 285 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Gabi2712g00002 285 PANTHER PROTEIN BREVIS RADIX-LIKE 1 33 212 IPR044532 -
Gabi2712g00002 285 MobiDBLite consensus disorder prediction 108 122 - -
Gabi2712g00002 285 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2712g00002 Gabi-Chr2712 2087 8100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2712g00002 22 215 Major Intrinsic Protein MIP AT1G31880 47.248 1.30e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2712g00002 - - rcu:8280074 182.57