Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2710g00023 ATGAAAGTCAAGATCTTATGGCATGCTGTTGCTTCGTGGACTTGGGATGCCCAGGATGAAACATGTGGGATTTGTAGGATGGCCTTTGATGGATGTTGTCCTGACTGTAAACTTCCTGGGGATGACTGCCCACTGATTTGGGGTGCATGCAATCACGCATTTCATTTGCACTGTATCTTGAAATGGGTGAATTCTCAGACATCACAAGCGCATTGCCCCATGTGCCGTCGGGAATGGCAGTTTAAAGGATGA 252 0.4722 MKVKILWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2710g00023 83 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 1 82 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Gabi2710g00023 83 CDD RING-H2_APC11 19 81 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Gabi2710g00023 83 PANTHER RING BOX 3 82 - -
Gabi2710g00023 83 FunFam Anaphase-promoting complex subunit 11 1 83 - -
Gabi2710g00023 83 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 83 IPR013083 -
Gabi2710g00023 83 SUPERFAMILY RING/U-box 6 82 - -
Gabi2710g00023 83 ProSiteProfiles Zinc finger RING-type profile. 33 76 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2710g00023 Gabi-Chr2710 328456 332377 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2710g00023 33 76 C3H Transcription Factor Family AT1G72220 41.304 7.86e-07 43.1