Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2710g00013 ATGGGCGGAGGTGGAGCGACGGTTAACGTGGAGGCTCAGTACTCATCGGCGAAGACGTCGGTGTGGTGGGACATCGAGAACTGCCATGTTCCGAGAGGTTGTGATCCACACGCCATCGCCCAGAACATTAGCTCTGCCCTCGTTCGCATGAATTACTGTGGTCCAGTTTCCATCTCCGCCTACGGCGACACCACTCGCATCACTGCCTCCGTTCAACACGCCCTCTCCAGCACCGGCATCTCCCTCAACCACGTCCCTGCCGGCGTTAAGGATGCAAGTGACAAGAAGATTCTTGTAGACATGCTGTTCTGGGCGGTGGACAATCCTGCACCTGCTAATTACTTATTAATTTCGGGTGATCGAGACTTCTCCAATGCTCTTCATCAATTGCGGATGAGGAGGTATAATATTCTTCTTGCACAACCTCAGAAAGCGTCTGCACCCTTAGTTGCAGCTGCTAAGAGCGTGTGGCTTTGGACTAGCCTATTAGCTGGAGGACCTCCTCTTACCAGCGGTGAATCACAACAACTTGGTAATAATAGCCCACAATCATCTTCTGACACCTTGTCCATTCCACTGTCTAATGCTGTTCAGACAACACAACACTTGGATTCCTACTCGGAACTCCATTCAGGAATTCAGAAATTTCCTAATACAAGAAGGCCATTCGATTCTAAACATCATGGGAAAATGACTTGGAGAAGTCCAAGTCAACCAAATGGACCTATAGCCATGAATCCGGCTCCAATTGGACTTCAAGAAAATTTTAGCAATATAAACTCTTCTCGACCTGGCAACTATAACTCTAATGTACCCCCAAATGGATCTACTCCAAATTTTATTCGTCATGTCAATCCTGATCAATTGTGGAGCAATAATGGTAATCTACAGGGCAATCATCAAAATCCATATTCACAGCCATTAAGATCAAACAGTCTTCCTATGCGACCTCCTTTTGTACCAAGTAATTCATATTCTTCAAATTCCCAAACTAATGCAACTTCACTAGTGCCACCTAGGACTGTTGGGCCCAGCTTCTCTGCAGGACCACTTACTAATGTGCCAGATATTGGTAATATAAACATTTCTGGATATCCCAACGGAGCTCATGATCCACGTCCGGTTAAGCAATGGAATGGAGAGTTGAAACAGAGTTCTAATAGTATTACTCCAAATCCTGTAAGGTCAATTGATGAACAAAATGGACATATGGTACACAGCACACAACCATTATACAATGGCTATCCACATGGTCCAGAAGATCGGACTACATCATTGGCAGCAATGGGTAATAATAACCTTCCTGGTAATGGTATGTGGGGATCTCCAGGATGCCCTAAACCTTCTGAATATGTCCAAGGGCTTATAGGGGTTGTTTTACTAGCCTTGAACACACTAAAAACTGAAAAACTTATGCCAACTGAGTCAAATATAGCAGATTGCATTCGATGTGGAGATCCCAAGCATCGCAACACTGATGTCAGGAAGGCTTTGGAGTGTGCTATTGAGCAGCAGATGGTGGTGAAGCAGAATTTAGGTTCTTTGCAGTTGTATGTTGGTAAGAATGATAAGCTTTGGAAGTGTGTAAATCTTTTAGGTGGTAATCCTAACAAGCACTCAAAAGAAACATGGGATGAAATTCAAAAATTTCTAACAACTCCTTCTGCAAGATCAGCAATAATGGGTACTCAGTGCAAGTATGAAGCAGGTATTGTCATTAAGAATATGTGCCTTAAAAGTCATGCTTTGGGTGATGTCCTACATATGTTAAACATGGTGATTACCCATAAAAAATGGATTGTGCATCATCAGTCAGGCTGGCAACCACTTAACATTACTCTTGCTGAGGTCAATTCTGATTCAGAGGTCATAGCTGTCCCATAA 1884 0.4374 MGGGGATVNVEAQYSSAKTSVWWDIENCHVPRGCDPHAIAQNISSALVRMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTSGESQQLGNNSPQSSSDTLSIPLSNAVQTTQHLDSYSELHSGIQKFPNTRRPFDSKHHGKMTWRSPSQPNGPIAMNPAPIGLQENFSNINSSRPGNYNSNVPPNGSTPNFIRHVNPDQLWSNNGNLQGNHQNPYSQPLRSNSLPMRPPFVPSNSYSSNSQTNATSLVPPRTVGPSFSAGPLTNVPDIGNINISGYPNGAHDPRPVKQWNGELKQSSNSITPNPVRSIDEQNGHMVHSTQPLYNGYPHGPEDRTTSLAAMGNNNLPGNGMWGSPGCPKPSEYVQGLIGVVLLALNTLKTEKLMPTESNIADCIRCGDPKHRNTDVRKALECAIEQQMVVKQNLGSLQLYVGKNDKLWKCVNLLGGNPNKHSKETWDEIQKFLTTPSARSAIMGTQCKYEAGIVIKNMCLKSHALGDVLHMLNMVITHKKWIVHHQSGWQPLNITLAEVNSDSEVIAVP 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2710g00013 627 PANTHER LIMKAIN B LKAP 15 509 IPR024768 GO:0005777|GO:0010468
Gabi2710g00013 627 MobiDBLite consensus disorder prediction 170 190 - -
Gabi2710g00013 627 CDD PIN_limkain_b1_N_like 18 142 - -
Gabi2710g00013 627 Pfam OST-HTH Associated domain 564 619 IPR025677 -
Gabi2710g00013 627 Pfam NYN domain 18 154 IPR021139 GO:0004540
Gabi2710g00013 627 MobiDBLite consensus disorder prediction 213 341 - -
Gabi2710g00013 627 MobiDBLite consensus disorder prediction 251 341 - -
Gabi2710g00013 627 Gene3D - 9 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2710g00013 Gabi-Chr2710 209211 213185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2710g00013 11 201 C2H2 Transcription Factor Family AT5G61190 71.503 3.96e-84 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2710g00013 - - gmx:100794384 1024.23