Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi270g00005 ATGGCTTCCTCAAGTGGAACATCTTCAGGATCATCTCTGCTTCAAAACTCTGGTTCAGAGGAGGACTTGCAGGCGTTGATGGATCAGAGGAAGAGGAAGAGAATGATATCAAACCGTGAATCTGCAAGGCGATCTCGAATGAGGAAACAGAAGCACTTGGATGATCTTGCTTCTCAGGTGGCTCAGCTCAGGAACGAGACTCACCAGATACTCACATCCCTCAACCTCACTACCCAACAGTACTTGACTATTGAGGCTGAAAACTCAGTTCTGAGAGCTCAAGTGGGTGAGCTAAGCCACAGGCTAGGGTCTTTGAACGAAATTATCGACCTCTTCAATGCCACCAATGGGTTTTTTGGTTCTTCTGCAGGGGCACCAAGCTCCTTCAATGAGCCCCCCAATAGCTTCTTCAACCCTTTAAATATGGCCTATGTGAACCAACCAATCATGGCTTCTGCAGACATGTTGCTGTACTGA 477 0.4738 MASSSGTSSGSSLLQNSGSEEDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLASQVAQLRNETHQILTSLNLTTQQYLTIEAENSVLRAQVGELSHRLGSLNEIIDLFNATNGFFGSSAGAPSSFNEPPNSFFNPLNMAYVNQPIMASADMLLY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi270g00005 158 Pfam bZIP transcription factor 30 81 IPR004827 GO:0003700|GO:0006355
Gabi270g00005 158 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Gabi270g00005 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Gabi270g00005 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Gabi270g00005 158 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Gabi270g00005 158 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 155 - -
Gabi270g00005 158 FunFam BZIP transcription factor 28 79 - -
Gabi270g00005 158 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Gabi270g00005 158 MobiDBLite consensus disorder prediction 24 50 - -
Gabi270g00005 158 MobiDBLite consensus disorder prediction 1 50 - -
Gabi270g00005 158 MobiDBLite consensus disorder prediction 1 23 - -
Gabi270g00005 158 Coils Coil 46 66 - -
Gabi270g00005 158 Gene3D - 28 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi270g00005 Gabi-Chr270 34007 35416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi270g00005 24 158 bZIP Transcription Factor Family AT4G34590 56.115 1.63e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi270g00005 bZIP_1 4.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi270g00005 K25786 - gmx:100101862 224.942