Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2707g00032 ATGGTGAAGATGGAGCTCATAAAATGGGTTCCTTACATTTTGGTTGTTTTTCTGGTTTTGGTTAATGGGTTATTTGCCTTGTACACTCCTCCTGATAGTTATCTAATTGCTTGTGGTTCTTCCCAAAACATCACCTTCCAAGGTCGCACTTTTGTTCCTGATTCACAACATTCTTCACTTGTATTGAAAACTGGGAATTCTTTTGTAGCTAGTTCCAATTCTAGTGTCCCTTTTCCAATTTACCAATCAGCTCGGGTTTTCACCGAGAAAGCTTCTTACATATTTGAAATTCAGCAAGAAGGTAGGCACTGGGTTAGGCTATATTTTTTCCCTCTTCCCAACTCTGGCCATAATTTGACTTCTGCTTCTTTATCAGTTGTTACTGATGATTTTGTGTTGTTGAGTAACTTCACCTTTAAGAAGTACAATGGTTCTTATATGTTCAAGGAGTATGCAATCAATGTTACCTCTGATACCTTGACTGTCACTTTCATTCCTTCAAATGGTTCAGTAGCCTTTGTCAATGCAATTGAAGTTGTGTCAATACCAAATGAGTTGTTTGTTGATCAGGCATTGGCTATTGACCCACCAGCCCCATTCAATGGACTTTCTGAACTTGCCTTTGAAACTGTTTATCGCTTGAACATGGGTGGTCCTTTGATTACTGCCCAGAATGACACCCTGGGAAGGACTTGGATGAATGATCAGAATTACCTCCATGTGAACAGCTCTGTCCTTAATGTGTCGGTCAACCCTTCGAGCATTAAGTATCCGGTGGCTGTTAGGCGCGAGACAGCCCCAAATTTGGTCTATGCCACTGCTGAAACAATGGGGGATCCGAATGTAAATGATCCAAATTTCAACATTACTTGGGTCTTCCCTGTGGATCCAAATTTCTCCTATTTTATCCGGGTGCACTTCTGTGATATTATGAGCAAGTCACTCAATACTTTAGTGTTCAATTTGTTCATAAACTCTGACATTGCTCTTGGAAGTCTTGACCTCTCATCCATAACTAATGATTTGTCTGTGCCTTACTACAAGGACATGGTTTCCAATGTCTCAGCAGACTCTAACACTTTGACTATAAGTGTTGGTCCAGATACAATGGCAGAAACCAGAAATGCCACTATGAATGGCCTCGAGATAATGAAGATCAGCAATTTATTAAAGAGCTTGGATGGGCTTTCTTCAGTTGACAATCTTCTTCCTAGTTCTCCTTCAAAGAAGAACAAGATAGGAATAATAGTTGGTTCTGCTGTTGGGGCTCTAGCAGCTCTAGTAGTGGTTGGTTTGTGTTTTTGCTGCTTGGTGGGTCGCAAGTCAAAGACTACTACTCAACCGGGCCATTCATGGCTGCCTTTATCCCTATATGGAAACTCTCTGACAATGACAAAAATGTCAACAACTTCACAGAAGAGTGGAACTGCAAGCTGCATCTCTCTAGCTTCATCGAATCTTGGAAGATTCTTCAGTTTCCAAGAAATCCTAGATGCAACCAACAAATTTGATGAGAAGCTACTTCTTGGTGTTGGTGGTTTTGGAAGGGTTTATAAGGGAACACTTGAAGATGGGACTAATGTAGCTGTTAAAAGGGGTAACCCAAGATCTGAGCAAGGTCTTGCTGAATTCCGAACAGAAATTGAAATGTTATCCAAGCTTCGCCATCGTCATCTTGTGTCTCTCATTGGTTATTGTGATGAGAGATCAGAAATGATTCTAGTCTATGAATATATGGCTAATGGACCCCTCCGGAGTCATTTGTATGGAACAGACCTGCCACCTCTTTCATGGAAGCAACGACTCGAAATTTGCATTGGAGCAGCAAGAGGCCTTCATTATCTACACACCGGAGCAGCTCAAAGCATAATTCACCGAGATGTGAAGACAACAAACATCCTCTTAGATGAGAACTTTGTTGCTAAAGTTGCGGATTTTGGCCTCTCCAAAACTGGTCCTGCTCTTGATCAGACCCATGTAAGCACTGCTGTTAAAGGTAGTTTTGGTTATCTTGATCCTGAATACTTCAGAAGGCAACAGCTTACTGAGAAATCAGATGTGTATTCATTTGGAGTAGTATTAATGGAAGTGTTATGCACAAGACCAGCTTTGAACCCTGTCCTTCCAAGGGAGCAGGTCAATATAGCTGAGTGGGCAATGACCTGGCAGAAAAAAGGGATGCTTGACCAAATCATGGATCAAAATCTGGTGGGAAAGGTGAATCCAGCTTCTCTCAAGAAGTTTGGGGAGACAGCTGAGAAGTGCTTGGCCGAGCACGGCGTTGACCGGCCGTCTATGGGAGATGTCTTGTGGAATCTTGAATATGCTTTGCAGCTTCAAGAGACCTCATCAGCTCTCATGGAACCTGAAGATAACAGCACAAACCACATCACTGGAATTCAGTTGACACCCTCTGAGCATTTTGATCACACTGTGAGTATGATTGATGGGGGAAACTCTTGCACGGATGATGATGCAGTAGATACTGCTACAAGTGCAGTGTTCTCACAATTGGTAAACCCTCGTGGAAGATGA 2535 0.4225 MVKMELIKWVPYILVVFLVLVNGLFALYTPPDSYLIACGSSQNITFQGRTFVPDSQHSSLVLKTGNSFVASSNSSVPFPIYQSARVFTEKASYIFEIQQEGRHWVRLYFFPLPNSGHNLTSASLSVVTDDFVLLSNFTFKKYNGSYMFKEYAINVTSDTLTVTFIPSNGSVAFVNAIEVVSIPNELFVDQALAIDPPAPFNGLSELAFETVYRLNMGGPLITAQNDTLGRTWMNDQNYLHVNSSVLNVSVNPSSIKYPVAVRRETAPNLVYATAETMGDPNVNDPNFNITWVFPVDPNFSYFIRVHFCDIMSKSLNTLVFNLFINSDIALGSLDLSSITNDLSVPYYKDMVSNVSADSNTLTISVGPDTMAETRNATMNGLEIMKISNLLKSLDGLSSVDNLLPSSPSKKNKIGIIVGSAVGALAALVVVGLCFCCLVGRKSKTTTQPGHSWLPLSLYGNSLTMTKMSTTSQKSGTASCISLASSNLGRFFSFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTPSEHFDHTVSMIDGGNSCTDDDAVDTATSAVFSQLVNPRGR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2707g00032 844 CDD STKc_IRAK 509 774 - -
Gabi2707g00032 844 SMART serkin_6 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2707g00032 844 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Gabi2707g00032 844 FunFam receptor-like protein kinase FERONIA 465 578 - -
Gabi2707g00032 844 PANTHER OS07G0166700 PROTEIN 489 780 IPR045272 GO:0004714|GO:0006468
Gabi2707g00032 844 FunFam Putative receptor-like protein kinase 33 183 - -
Gabi2707g00032 844 FunFam Receptor-like protein kinase FERONIA 579 795 - -
Gabi2707g00032 844 Pfam Protein tyrosine and serine/threonine kinase 508 770 IPR001245 GO:0004672|GO:0006468
Gabi2707g00032 844 ProSiteProfiles Protein kinase domain profile. 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2707g00032 844 Pfam Malectin-like domain 36 386 IPR024788 -
Gabi2707g00032 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Gabi2707g00032 844 Gene3D - 33 182 - -
Gabi2707g00032 844 Gene3D - 206 387 - -
Gabi2707g00032 844 FunFam Receptor-like protein kinase FERONIA 207 388 - -
Gabi2707g00032 844 Gene3D Phosphorylase Kinase; domain 1 462 578 - -
Gabi2707g00032 844 Gene3D Transferase(Phosphotransferase) domain 1 579 799 - -
Gabi2707g00032 844 SUPERFAMILY Protein kinase-like (PK-like) 482 774 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2707g00032 Gabi-Chr2707 299848 303324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2707g00032 4 844 Receptor kinase-like Gene Family AT3G46290 51.934 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi2707g00032 Malectin_like 5e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2707g00032 - - gmx:100809700 1481.46