Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2707g00010 ATGATGCTATCAGCTTCGCCATGTTCGTTGGTGAGGAGCTCGCTGGAGGAGATGCTTGATTCGCTTCGCATGAGGGATGAAGAAGAAGAGAAGAAAAAGGACTTGCCGCCGGCATTGCCAGTTCGGCCGGCATCCCGGGCCCGGCTTCCTCCGGCGAGGCGGTCGTTGCCGAATAACTTCAAGGTTGGCGGCGGCGACCGCGTCTCGGTGGAGAGTGGATTTGATGCCAAGGAAGAGAATAAGAGGAAGGAAAATGTTGAGGGACTCACGAGAACAAGAAGTAGTTTTGGGATCAAGAGGATGAGGAAGGATTTGGAATCCCCTTACATGGCCACATCAGAAGAGAACTTGCCTCTTTCAGCATCTACAGCTTCTGTAGCTTCCTCAGAAATGATGTGGGAATTGGAGGGTGACAGCATTTCTTATTTCATCAGAAAGAAGCTTCGTGTTTGGAGTAGGCAACCAAGAGGGAAGTGGGAACTAGGAAGGATACAATCAACTTCTGGAGAGGAAGCATCTGTTTCACTCTCAAATGGAAATGTTATGAAGGTGGCCAGATCAGAGCTCCTACCAGCTAATCCTGATGTTTTGGAGGGTGTGGATGATCTAATTAAGCTCAGTTATTTGAATGAGCCATCGGTTCTTCACAATCTGAAGTTTAGATATTCTCAGGAGATGATTTATAGTAAAGCAGGGCCCATTTTAATTGCACTCAATCCGTTCAAAGATCTCCAGATTTATGGAAATGATTATGTCTCAGCTTATAGGCAGAGATTTATTGATAGTCCTCATGTTTATGCTATGGCAGATGCGGCTTATAACAAGATGATAAGAGATGAAGAAAATCAGTCCATTATTATAAGTGGTGAGAGTGGATCTGGGAAGACAGAGACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGAAGTTGTGGGATAGAAAATGAAGTTCTTCAGACAAATTGTATACTGGAAGCTTTTGGGAATGCAAAAACATCTACGAATCATAGCTCTAGCAGATTTGGAAAGTTGATTGAAATTCATTTCAGCGCCTTGGGCAAAATATGTGGTGCTAAAATTCAATCCTTTCTATTGGAAAAGTCAAGAGTTGCTCAACTGGCCAGTGGTGAGAGGTCGTATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAGAGACTGAACCTTAGAACAACCAGTGAATATAAATATCTAAATCAGAGCGGCTGCCTGACAATTGATGGGGTTGACGATGCTAAAAATTTTCAACAGCTGACGAAAGCATTGGATACTGTTCGAATTTGCAAAGAGGATCAAGAGCTGATCTTTAAGATGCTTGCTGCAATACTATGGCTGGGAAATATATCATTCCAAGTCACTGACTGTGAAAATCACATTGAGGTTGTAGATGATGAAGCTGTAACCAGTGCTTCGCAGCTGATGGGTTGCAGTTCCCAGGAACTATTGGCAGCATTAACTACCCATAAAATCCAATCTGACAAGGATATTATTGCCAAAAGGTTGACATTGAGGCAGGCGATTGATACAAGAGATGCAATTGCAAAAGTTATCTATGTATGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAAAAATGTATTGGGAAATCTATAAGTATCCTTGATATATATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAGCAGTTTTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTTATTCGGCATCTGTTTAAACTTGAGCAGGAGGATTATGAATCAGATGGCATAGATTGGACTAAAGTAGATTTTGATGACAATCAAGAATGCTTGGATCTATTTGAGAAGAATCCTCATGGTCTACTCTCTTTGTTGGATGTGGAATCTAATTTTCCCAAGGCTTCTGACTTAACATTTGCCAACAAAATTAAGAATCACCTGAACGCTAATCCTTGTTTCAAAGGGGAAAGTGGCAGAGCTTTCAGTGTTCGTCACTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGACGCGCTGTTTTCTGATTCCATTCAACTCCTATCATCATGTAATTGTGAACTGCTGCAGTTGTTCTCCAAAATGTTTAACCAGTCTCCGAAGCTATCAAATTCCCTCCACATTGGCACACTGGACTCACAGAAGCAGGGTGTTGGAACAAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAGTTGGAGAGCACCACACCTCACTTTATTCGCTGCATAAAGCCAAATACTAAGCAGCTTCCTGGCATTTATGATGAAGACCTTGTCCTACAACAGCTAAGGTGTTGTGGAATTCTAGAAGTTGTTAGAATTTCAAGGGCTGGATATCCTACTCGAATGACTCATCAAAAGTTTGCTAGAAGGTATGGGTTTCTGCTTTCTGAGGCCAATGTACCTCAAGATCCATTGAGCATCTCAGTTGCTGTTATGCAAAAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTACACCAAACTATATCTTCGAGTGGGGCAGATTGGTGCACTGGAGGACAAGAGAAAACAGGTTTTGCTGGGAATACTTAGGATTCAAAAATGCTTCCGTGGTCATCAAGCTCGCAGTTACTTCAGTGAACTTAAGAATGAAGTGGCAACATTACAATCATTTATTCGTGGAGAAATTACGAGAAGGAAATATGGTGTTATGATGAAGTCTTCTATAACCATTTATTCTAAAAAACTTGAGGAGATCCATGCAATCATACTACTGCAATCTGTAATTCGTGGCTGGCTGGATCGAAGATATGCTAGTCACATGAATAAGTTAAAGAAATATCCTGAAAATGCAAAACCTAGGCGAAAGTCACTTGTGAAGATGCCAGAATTGAAGCAGGTTTTGTCCAAAGAGTCAACTCAGAATCTGCCTTCAGCTTTAGCAGAATTCCAAAGGCGGCTTGACAAGGCTAAAGCAATTGTGGAGCAAAAGGAAGAGGAAAATAGTGAATTGAGGGAAAAACTAAAACAATCTGAGAGAAAGAGGGTTGAGTATGAGGCAAAGATGAAATCAATGGAGGAGGCATGGCAAAAACAGGTCGCATCTTTGCAAGTGAGTCTTGTTGCTGCTAAAAAGAGCCTTGCTTCTGAGGATACAGCTATTCAACCTGTAATGCCTGTAATGCGTGATCTACTGTCGCGTGAACTGGTGTCACCTCGGTACTACGATTCTGAAGATGCTACTTCTATGGGATCTCGAACTCCCGGTGGGAGCACACCTTTAAAGATTTCTGGTAGTCTCTCTGTCTCTTATGCAGGGAGACAGTCTAACGGTGCTTTGACTACAGTCAGCAATCTGATGAAGGAATTTGAGCAGCGAAGACTGAACTTTGATGATGAAGTAAAAGCTCTGAATGAGGTTAAACCAGGGCAGTCTGCGAACGTGAATTACGTTGAAGAAATTCGGAATCTTAAACATAGATTTGAGGGATGGAAGAAACAATACAAGGTTAGATTACGTGAGACAAAAGCAAAGCTTCAAAAATTAGGGAATTCAGAAATGGAAAAAAGTCGGAGGACATGGTGGGGGAAATTAAGAGCATAA 3639 0.4141 MMLSASPCSLVRSSLEEMLDSLRMRDEEEEKKKDLPPALPVRPASRARLPPARRSLPNNFKVGGGDRVSVESGFDAKEENKRKENVEGLTRTRSSFGIKRMRKDLESPYMATSEENLPLSASTASVASSEMMWELEGDSISYFIRKKLRVWSRQPRGKWELGRIQSTSGEEASVSLSNGNVMKVARSELLPANPDVLEGVDDLIKLSYLNEPSVLHNLKFRYSQEMIYSKAGPILIALNPFKDLQIYGNDYVSAYRQRFIDSPHVYAMADAAYNKMIRDEENQSIIISGESGSGKTETAKIAMQYLAALGGGSCGIENEVLQTNCILEAFGNAKTSTNHSSSRFGKLIEIHFSALGKICGAKIQSFLLEKSRVAQLASGERSYHIFYQLCAGSSSDLKERLNLRTTSEYKYLNQSGCLTIDGVDDAKNFQQLTKALDTVRICKEDQELIFKMLAAILWLGNISFQVTDCENHIEVVDDEAVTSASQLMGCSSQELLAALTTHKIQSDKDIIAKRLTLRQAIDTRDAIAKVIYVCLFDWLVEQVNKSLEVGKKCIGKSISILDIYGFESFQKNSFEQFCINYANERLQQHFIRHLFKLEQEDYESDGIDWTKVDFDDNQECLDLFEKNPHGLLSLLDVESNFPKASDLTFANKIKNHLNANPCFKGESGRAFSVRHYAGEVLYDTNGFLEKNRDALFSDSIQLLSSCNCELLQLFSKMFNQSPKLSNSLHIGTLDSQKQGVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQLPGIYDEDLVLQQLRCCGILEVVRISRAGYPTRMTHQKFARRYGFLLSEANVPQDPLSISVAVMQKFNIPSEMYQVGYTKLYLRVGQIGALEDKRKQVLLGILRIQKCFRGHQARSYFSELKNEVATLQSFIRGEITRRKYGVMMKSSITIYSKKLEEIHAIILLQSVIRGWLDRRYASHMNKLKKYPENAKPRRKSLVKMPELKQVLSKESTQNLPSALAEFQRRLDKAKAIVEQKEEENSELREKLKQSERKRVEYEAKMKSMEEAWQKQVASLQVSLVAAKKSLASEDTAIQPVMPVMRDLLSRELVSPRYYDSEDATSMGSRTPGGSTPLKISGSLSVSYAGRQSNGALTTVSNLMKEFEQRRLNFDDEVKALNEVKPGQSANVNYVEEIRNLKHRFEGWKKQYKVRLRETKAKLQKLGNSEMEKSRRTWWGKLRA 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2707g00010 1212 ProSiteProfiles Myosin motor domain profile. 198 868 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00010 1212 SMART iq_5 869 891 IPR000048 GO:0005515
Gabi2707g00010 1212 SMART iq_5 892 914 IPR000048 GO:0005515
Gabi2707g00010 1212 SMART iq_5 929 951 IPR000048 GO:0005515
Gabi2707g00010 1212 Gene3D - 381 437 - -
Gabi2707g00010 1212 ProSiteProfiles IQ motif profile. 930 958 IPR000048 GO:0005515
Gabi2707g00010 1212 CDD MYSc_Myo8 212 856 IPR036022 -
Gabi2707g00010 1212 Coils Coil 1177 1197 - -
Gabi2707g00010 1212 FunFam Unconventional myosin-XIX 569 758 - -
Gabi2707g00010 1212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 918 IPR027417 -
Gabi2707g00010 1212 Gene3D Myosin VI head, motor domain, U50 subdomain 438 546 - -
Gabi2707g00010 1212 Pfam Myosin head (motor domain) 200 856 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00010 1212 MobiDBLite consensus disorder prediction 22 64 - -
Gabi2707g00010 1212 Gene3D - 874 920 - -
Gabi2707g00010 1212 PANTHER MYOSIN 191 1199 - -
Gabi2707g00010 1212 Coils Coil 1132 1152 - -
Gabi2707g00010 1212 PRINTS Myosin heavy chain signature 610 638 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00010 1212 PRINTS Myosin heavy chain signature 282 307 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00010 1212 PRINTS Myosin heavy chain signature 557 585 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00010 1212 PRINTS Myosin heavy chain signature 228 247 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00010 1212 PRINTS Myosin heavy chain signature 325 352 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00010 1212 Gene3D - 802 869 - -
Gabi2707g00010 1212 ProSiteProfiles IQ motif profile. 893 922 IPR000048 GO:0005515
Gabi2707g00010 1212 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 145 194 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00010 1212 Coils Coil 992 1040 - -
Gabi2707g00010 1212 Gene3D Kinesin motor domain 197 801 IPR036961 -
Gabi2707g00010 1212 ProSiteProfiles IQ motif profile. 873 899 IPR000048 GO:0005515
Gabi2707g00010 1212 Coils Coil 12 32 - -
Gabi2707g00010 1212 Gene3D - 569 758 - -
Gabi2707g00010 1212 SMART MYSc_2a 192 869 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00010 1212 FunFam Myosin heavy chain 381 437 - -
Gabi2707g00010 1212 MobiDBLite consensus disorder prediction 22 37 - -
Gabi2707g00010 1212 Pfam IQ calmodulin-binding motif 874 890 IPR000048 GO:0005515
Gabi2707g00010 1212 Pfam IQ calmodulin-binding motif 932 949 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2707g00010 Gabi-Chr2707 35918 48800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2707g00010 1 1209 Myosins gene family AT5G54280 60.193 0.0 1460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2707g00010 K10357 - gmx:100802074 1762.27