Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2707g00009 ATGATGCTATCAGCTTCGCCATGTTCGTTGGTGAGGAGCTCGCTGGAGGAGATGCTTGATTCGCTTCGCATGAGGGATGAAGAAGAAGAGAAGAAAAAGGACTTGCCGCCGGCATTGCCAGTTCGGCCGGCATCCCGGGCCCGGCTTCCTCCGGCGAGGCGGTCGTTGCCGAATAACTTCAAGGTTGGCGGCGGCGACCGCGTCTCGGTGGAGAGTGGATTTGATGCCAAGGAAGAGAATAAGAGGAAGGAAAATGTTGAGGGACTCACGAGAACAAGAAGTAGTTTTGGGATCAAGAGGATGAGGAAGGATTTGGAATCCCCTTACATGGCCACATCAGAAGAGAACTTGCCTCTTTCAGCATCTACAGCTTCTGTAGCTTCCTCAGAAATGATGTGGGAATTGGAGGGTGACAGCATTTCTTATTTCATCAGAAAGAAGCTTCGTGTTTGGAGTAGGCAACCAAGAGGGAAGTGGGAACTAGGAAGGATACAATCAACTTCTGGAGAGGAAGCATCTGTTTCACTCTCAAATGGAAATGTTATGAAGGTGGCCAGATCAGAGCTCCTACCAGCTAATCCTGATGTTTTGGAGGGTGTGGATGATCTAATTAAGCTCAGTTATTTGAATGAGCCATCGGTTCTTCACAATCTGAAGTTTAGATATTCTCAGGAGATGATTTATAGTAAAGCAGGGCCCATTTTAATTGCACTCAATCCGTTCAAAGATCTCCAGATTTATGGAAATGATTATGTCTCAGCTTATAGGCAGAGATTTATTGATAGTCCTCATGTTTATGCTATGGCAGATGCGGCTTATAACAAGATGATAAGAGATGAAGAAAATCAGTCCATTATTATAAGTGGTGAGAGTGGATCTGGGAAGACAGAGACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGAAGTTGTGGGATAGAAAATGAAGTTCTTCAGACAAATTGTATACTGGAAGCTTTTGGGAATGCAAAAACATCTACGAATCATAGCTCTAGCAGATTTGGAAAGTTGATTGAAATTCATTTCAGCGCCTTGGGCAAAATATGTGGTGCTAAAATTCAATCCTTTCTATTGGAAAAGTCAAGAGTTGCTCAACTGGCCAGTGGTGAGAGGTCGTATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAGAGACTGAACCTTAGAACAACCAGTGAATATAAATATCTAAATCAGAGCGGCTGCCTGACAATTGATGGGGTTGACGATGCTAAAAATTTTCAACAGCTGACGAAAGCATTGGATACTGTTCGAATTTGCAAAGAGGATCAAGAGCTGATCTTTAAGATGCTTGCTGCAATACTATGGCTGGGAAATATATCATTCCAAGTCACTGACTGTGAAAATCACATTGAGGTTGTAGATGATGAAGCTGTAACCAGTGCTTCGCAGCTGATGGGTTGCAGTTCCCAGGAACTATTGGCAGCATTAACTACCCATAAAATCCAATCTGACAAGGATATTATTGCCAAAAGGTTGACATTGAGGCAGGCGATTGATACAAGAGATGCAATTGCAAAAGTTATCTATGTATGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAAAAATGTATTGGGAAATCTATAAGTATCCTTGATATATATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAGCAGTTTTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTTATTCGGCATCTGTTTAAACTTGAGCAGGAGGATTATGAATCAGATGGCATAGATTGGACTAAAGTAGATTTTGATGACAATCAAGAATGCTTGGATCTATTTGAGAAGAATCCTCATGGTCTACTCTCTTTGTTGGATGTGGAATCTAATTTTCCCAAGGCTTCTGACTTAACATTTGCCAACAAAATTAAGAATCACCTGAACGCTAATCCTTGTTTCAAAGGGGAAAGTGGCAGAGCTTTCAGTGTTCGTCACTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGACGCGCTGTTTTCTGATTCCATTCAACTCCTATCATCATGTAATTGTGAACTGCTGCAGTTGTTCTCCAAAATGTTTAACCAGTCTCCGAAGCTATCAAATTCCCTCCACATTGGCACACTGGACTCACAGAAGCAGGGTGTTGGAACAAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAGTTGGAGAGCACCACACCTCACTTTATTCGCTGCATAAAGCCAAATACTAAGCAGCTTCCTGGCATTTATGATGAAGACCTTGTCCTACAACAGCTAAGGTGTTGTGGAATTCTAGAAGTTGTTAGAATTTCAAGGGCTGGATATCCTACTCGAATGACTCATCAAAAGTTTGCTAGAAGGTATGGGTTTCTGCTTTCTGAGGCCAATGTACCTCAAGATCCATTGAGCATCTCAGTTGCTGTTATGCAAAAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTACACCAAACTATATCTTCGAGTGGGGCAGATTGGTGCACTGGAGGACAAGAGAAAACAGGTTTTGCTGGGAATACTTAGGATTCAAAAATGCTTCCGTGGTCATCAAGCTCGCAGTTACTTCAGTGAACTTAAGAATGAAGTGGCAACATTACAATCATTTATTCGTGGAGAAATTACGAGAAGGAAATATGGTGTTATGATGAAGTCTTCTATAACCATTTATTCTAAAAAACTTGAGGAGATCCATGCAATCATACTACTGCAATCTGTAATTCGTGGCTGGCTGGATCGAAGATATGCTAGTCACATGAATAAGTTAAAGAAATATCCTGAAAATGCAAAACCTAGGCGAAAGTCACTTGTGAAGATGCCAGAATTGAAGCAGGTTTTGTCCAAAGAGTCAACTCAGAATCTGCCTTCAGCTTTAGCAGAATTCCAAAGGCGGCTTGACAAGGCTAAAGCAATTGTGGAGCAAAAGGAAGAGGAAAATAGTGAATTGAGGGAAAAACTAAAACAATCTGAGAGAAAGAGGGTTGAGTATGAGGCAAAGATGAAATCAATGGAGGAGGCATGGCAAAAACAGGTCGCATCTTTGCAAGTGAGTCTTGTTGCTGCTAAAAAGAGCCTTGCTTCTGAGGATACAGCTATTCAACCTGTAGATTCTGAAGATGCTACTTCTATGGGATCTCGAACTCCCGGGAGACAGTCTAACGGTGCTTTGACTACAGTCAGCAATCTGATGAAGGAATTTGAGCAGCGAAGACTGAACTTTGATGATGAAGTAAAAGCTCTGAATGAGGTTAAACCAGGGCAGTCTGCGAACGTGAATTACGTTGAAGAAATTCGGAATCTTAAACATAGATTTGAGGGATGGAAGAAACAATACAAGGTTAGATTACGTGAGACAAAAGCAAAGCTTCAAAAATTAGGGAATTCAGAAATGGAAAAAAGTCGGAGGACATGGTGGGGGAAATTAAGAGCATAA 3534 0.412 MMLSASPCSLVRSSLEEMLDSLRMRDEEEEKKKDLPPALPVRPASRARLPPARRSLPNNFKVGGGDRVSVESGFDAKEENKRKENVEGLTRTRSSFGIKRMRKDLESPYMATSEENLPLSASTASVASSEMMWELEGDSISYFIRKKLRVWSRQPRGKWELGRIQSTSGEEASVSLSNGNVMKVARSELLPANPDVLEGVDDLIKLSYLNEPSVLHNLKFRYSQEMIYSKAGPILIALNPFKDLQIYGNDYVSAYRQRFIDSPHVYAMADAAYNKMIRDEENQSIIISGESGSGKTETAKIAMQYLAALGGGSCGIENEVLQTNCILEAFGNAKTSTNHSSSRFGKLIEIHFSALGKICGAKIQSFLLEKSRVAQLASGERSYHIFYQLCAGSSSDLKERLNLRTTSEYKYLNQSGCLTIDGVDDAKNFQQLTKALDTVRICKEDQELIFKMLAAILWLGNISFQVTDCENHIEVVDDEAVTSASQLMGCSSQELLAALTTHKIQSDKDIIAKRLTLRQAIDTRDAIAKVIYVCLFDWLVEQVNKSLEVGKKCIGKSISILDIYGFESFQKNSFEQFCINYANERLQQHFIRHLFKLEQEDYESDGIDWTKVDFDDNQECLDLFEKNPHGLLSLLDVESNFPKASDLTFANKIKNHLNANPCFKGESGRAFSVRHYAGEVLYDTNGFLEKNRDALFSDSIQLLSSCNCELLQLFSKMFNQSPKLSNSLHIGTLDSQKQGVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQLPGIYDEDLVLQQLRCCGILEVVRISRAGYPTRMTHQKFARRYGFLLSEANVPQDPLSISVAVMQKFNIPSEMYQVGYTKLYLRVGQIGALEDKRKQVLLGILRIQKCFRGHQARSYFSELKNEVATLQSFIRGEITRRKYGVMMKSSITIYSKKLEEIHAIILLQSVIRGWLDRRYASHMNKLKKYPENAKPRRKSLVKMPELKQVLSKESTQNLPSALAEFQRRLDKAKAIVEQKEEENSELREKLKQSERKRVEYEAKMKSMEEAWQKQVASLQVSLVAAKKSLASEDTAIQPVDSEDATSMGSRTPGRQSNGALTTVSNLMKEFEQRRLNFDDEVKALNEVKPGQSANVNYVEEIRNLKHRFEGWKKQYKVRLRETKAKLQKLGNSEMEKSRRTWWGKLRA 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2707g00009 1177 ProSiteProfiles Myosin motor domain profile. 198 868 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00009 1177 SMART iq_5 869 891 IPR000048 GO:0005515
Gabi2707g00009 1177 SMART iq_5 892 914 IPR000048 GO:0005515
Gabi2707g00009 1177 SMART iq_5 929 951 IPR000048 GO:0005515
Gabi2707g00009 1177 Pfam IQ calmodulin-binding motif 874 890 IPR000048 GO:0005515
Gabi2707g00009 1177 Pfam IQ calmodulin-binding motif 932 949 IPR000048 GO:0005515
Gabi2707g00009 1177 ProSiteProfiles IQ motif profile. 930 958 IPR000048 GO:0005515
Gabi2707g00009 1177 CDD MYSc_Myo8 212 856 IPR036022 -
Gabi2707g00009 1177 PRINTS Myosin heavy chain signature 228 247 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00009 1177 PRINTS Myosin heavy chain signature 557 585 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00009 1177 PRINTS Myosin heavy chain signature 282 307 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00009 1177 PRINTS Myosin heavy chain signature 610 638 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00009 1177 PRINTS Myosin heavy chain signature 325 352 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00009 1177 Coils Coil 1142 1162 - -
Gabi2707g00009 1177 FunFam Myosin heavy chain 381 437 - -
Gabi2707g00009 1177 Coils Coil 1097 1117 - -
Gabi2707g00009 1177 Gene3D Kinesin motor domain 197 801 IPR036961 -
Gabi2707g00009 1177 Gene3D - 569 758 - -
Gabi2707g00009 1177 MobiDBLite consensus disorder prediction 22 64 - -
Gabi2707g00009 1177 Pfam Myosin head (motor domain) 200 856 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00009 1177 MobiDBLite consensus disorder prediction 1064 1088 - -
Gabi2707g00009 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 918 IPR027417 -
Gabi2707g00009 1177 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 145 194 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00009 1177 ProSiteProfiles IQ motif profile. 893 922 IPR000048 GO:0005515
Gabi2707g00009 1177 Coils Coil 992 1040 - -
Gabi2707g00009 1177 ProSiteProfiles IQ motif profile. 873 899 IPR000048 GO:0005515
Gabi2707g00009 1177 Coils Coil 12 32 - -
Gabi2707g00009 1177 SMART MYSc_2a 192 869 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi2707g00009 1177 Gene3D - 874 920 - -
Gabi2707g00009 1177 Gene3D - 381 437 - -
Gabi2707g00009 1177 FunFam Unconventional myosin-XIX 569 758 - -
Gabi2707g00009 1177 PANTHER MYOSIN 191 1164 - -
Gabi2707g00009 1177 MobiDBLite consensus disorder prediction 22 37 - -
Gabi2707g00009 1177 Gene3D Myosin VI head, motor domain, U50 subdomain 438 546 - -
Gabi2707g00009 1177 Gene3D - 802 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2707g00009 Gabi-Chr2707 35918 48800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2707g00009 1 1174 Myosins gene family AT5G54280 60.178 0.0 1454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2707g00009 K10357 - gmx:100802074 1723.75