Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2706g00019 ATGAGTTGCTTTTCATGTTTTTCTTCCAACGAAAAGAAAGTAGCAAAGAGGCCTAACAACAATGGCAAGAGAATACAACAGCCTGCTGCTCATCCTCCCAAGGAAACAGCCCAACCTCAGCCACATCAAGAGAATCATTATCACAAGGCAAGGGCCAACCCACAAATAGAACCTAAAATAAATAAGGAAGCCAACAAAGATACTGTGAACAATCATAACATTGCTGCACAAACGTTCACATTCAGGGAATTGGCTACTATCACAAAGAACTTTAGGCAGGAATGCCTAATAGGTGAAGGTGGATTTGGGAGGGTTTATAAAGGAAGACTTGAAAAAACCAACCAAGAAGTAGCTGTGAAGCAACTTGACAGGAATGGATTGCAAGGAAACAGAGAGTTTCTTGTTGAAGTTTTAATGTTGAGTCTTTTACACCACGAAAATCTTGTGAATCTAATTGGATATTGTGCTGATGGAGATCAGAGACTATTGGTATATGAGTACATGCCATTGGGATCTCTTGAGGACCATTTGCTTGATCTTCATCCACAACAAAAGCCTCTAGATTGGTTCATAAGAATGAAAATAGCTTTGGATGCTGCAAAAGGTCTAGAATATTTGCATGACAAGGCCAATCCTCCAGTTATCTACCGTGACTTAAAATCCTCCAACATTTTGTTGGACAAAGATTTCAATGCAAAACTCTCAGATTTTGGACTAGCCAAGCTTGGACCTACAGGGGACAAGTCTCATGTCTCTTCAAGGGTAATGGGTACTTATGGATACTGTGCCCCTGAGTATCAAAGAACTGGTCAACTCACTGTAAAATCAGATGTATACAGCTTTGGAGTTGTTTTGCTTGAATTGATCACTGGAAGGAGAGCCATTGACAACACAAGACTAACAAGGGAGCAAAACCTTGTTTCTTGGGCACATCCAGTATTCAAGGACCCTCATAGATACCAAGAATTAGCAGATCCACTTCTTCAAGGAAACTTTCCAATGAGATCATTGCATCAAGCAGTGGCAGTAGCAGCAATGTGTCTCAATGAGGAGCCATCAGTGAGGCCCTTAATAAGTGATGTTGTTACGGCCCTTAGTTTCCTTGGTACAACTCCAGGGTCTAAAGACCTTTCAGGAATGAATGCACCCATTGACATGCCTTCTCCACCACCAGAGCAAGAAGAAGCCAATAGCACCCCTTTGAATCTTCTTGACGATGATAGTGGTTTGGAACGCCAAAGAGCAGTTGCTGAAGCCATTGAATGGGGTTCAAATACTAGGAACAAAGCACAAAGGAATGAAAGTGCTTCCTCTTTGTAA 1320 0.4159 MSCFSCFSSNEKKVAKRPNNNGKRIQQPAAHPPKETAQPQPHQENHYHKARANPQIEPKINKEANKDTVNNHNIAAQTFTFRELATITKNFRQECLIGEGGFGRVYKGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHENLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLHPQQKPLDWFIRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDKDFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDNTRLTREQNLVSWAHPVFKDPHRYQELADPLLQGNFPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTTPGSKDLSGMNAPIDMPSPPPEQEEANSTPLNLLDDDSGLERQRAVAEAIEWGSNTRNKAQRNESASSL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2706g00019 439 PANTHER OS07G0668900 PROTEIN 3 372 - -
Gabi2706g00019 439 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Gabi2706g00019 439 MobiDBLite consensus disorder prediction 376 410 - -
Gabi2706g00019 439 Gene3D Transferase(Phosphotransferase) domain 1 168 375 - -
Gabi2706g00019 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Gabi2706g00019 439 Pfam Protein kinase domain 93 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2706g00019 439 SMART serkin_6 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2706g00019 439 SUPERFAMILY Protein kinase-like (PK-like) 70 368 IPR011009 -
Gabi2706g00019 439 MobiDBLite consensus disorder prediction 41 57 - -
Gabi2706g00019 439 ProSiteProfiles Protein kinase domain profile. 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2706g00019 439 MobiDBLite consensus disorder prediction 1 26 - -
Gabi2706g00019 439 CDD STKc_IRAK 97 365 - -
Gabi2706g00019 439 Gene3D Phosphorylase Kinase; domain 1 60 167 - -
Gabi2706g00019 439 MobiDBLite consensus disorder prediction 1 57 - -
Gabi2706g00019 439 FunFam Serine/threonine-protein kinase PBS1 168 381 - -
Gabi2706g00019 439 FunFam Serine/threonine-protein kinase PBS1 64 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2706g00019 Gabi-Chr2706 218535 221740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2706g00019 1 437 Glycoside Hydrolase AT3G07070 65.831 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gabi2706g00019 Pkinase 4.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2706g00019 - - gmx:100786405 760.37