Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2706g00009 ATGCGAGCCTATGGAGAAGAGGCAACACTCCTTTTAAGAGCTTGTGCATATATTATCATTGACCGGAAGAATGTTCCTATTAACTGCCAAAGTTGGGCAAACATACTTAAATCATACAAGCAAGATTGCTACAACATTTTGAAGGCCCCAAACACAATTGCTGTGCATCATTGTCTATTTTTCATGGGGAGAAAGTACAGGAGCAACAAAATAAAGTTTTGGGATTCAAATTTTAAACCTTCTTCATGCACCGGAGACCTAGTTATTACTAATATTCCTTGTGGTTTGCTTGAATATCAATGGTCGTCGTTTGTTGACTATCATTTGTGGTCAAATTATCAGGAATTAAATCCGGGACATGACGAGGATCGAAGTAAATTATACATTACAACTCACAAGAAAAAAAGATGTCTCTTAGGGAAAACAATTCTAAAGGGGCGTTTTGAGATGTTGTCCCTATCAGGCTCTTTTATGCTTTCAGAGAGTAGCGGCTCAAGCACTGATGGTCGTGTCATTGGGGGAGTAGTTGCTGGTGTGCTTATTGCAGCAAGTCCTGGAGGAGCATACACAGGACAAACTCTTACTCCACTTGGCCACTGTACTTGCCATTGGAACCGAGTGACATCGACAAATGAAGCAAATTCGGCTGACTCTGAGGCTGCAGTAAAATTTAAATATAGATCAAGAGATGCATCTATCTTATGGGATGTCCCTTGCAAACTGTACCTATCTTAG 735 0.4041 MRAYGEEATLLLRACAYIIIDRKNVPINCQSWANILKSYKQDCYNILKAPNTIAVHHCLFFMGRKYRSNKIKFWDSNFKPSSCTGDLVITNIPCGLLEYQWSSFVDYHLWSNYQELNPGHDEDRSKLYITTHKKKRCLLGKTILKGRFEMLSLSGSFMLSESSGSSTDGRVIGGVVAGVLIAASPGGAYTGQTLTPLGHCTCHWNRVTSTNEANSADSEAAVKFKYRSRDASILWDVPCKLYLS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2706g00009 244 CDD DUF296 142 182 IPR005175 -
Gabi2706g00009 244 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 143 185 IPR039605 GO:0003680
Gabi2706g00009 244 SUPERFAMILY AF0104/ALDC/Ptd012-like 141 185 - -
Gabi2706g00009 244 Pfam Plants and Prokaryotes Conserved (PCC) domain 135 185 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2706g00009 Gabi-Chr2706 81049 85819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2706g00009 140 185 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 50.000 3.37e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2706g00009 - - ccaj:109792580 121.324