Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2706g00007 ATGCAAATGCGAGCCTATGGAGAAGAGGCAACACTCCTTTTAAGAGCTTGTGCATATATTATCATTGACCGGAAGAATGTTCCTATTAACTGCCAAAGTTGGGCAAACATACTTAAATCATACAAGCAAGATTGCTACAACATTTTGAAGGCCCCAAACACAATTGCTGTGCATCATTGTCTATTTTTCATGGGGAGAAAGTACAGGAGCAACAAAATAAAGTTTTGGGATTCAAATTTTAAACCTTCTTCATGCACCGGAGACCTAGTTATTACTAATATTCCTTGTGGTTTGCTTGAATATCAATGGTCGTCGTTTGTTGACTATCATTTGTGGTCAAATTATCAGGAATTAAATCCGGGACATGACGAGGATCGAAGTAAATTATACATTACAACTCACAAGAAAAAAAGATGTCTCTTAGGGAAAACAATTCTAAAGGGGCGTTTTGAGATGTTGTCCCTATCAGGCTCTTTTATGCTTTCAGAGAGTAGCGGCTCAAGCACTGATGGTCGTGTCATTGGGGGAGTAGTTGCTGGTGTGCTTATTGCAGCAAGTCCTGGAGGAGCATACACAGGACAAACTCTTACTCCACTTGGCCACTGTACTTGCCATTGGAACCGAGTGACATCGACAAATGAAGCAAATTCGGCTGACTCTGAGGCTGCAGTAAAATTTAAATATAGATCAAGAGATGCATCTATCTTATGGGATGTCCCTTGCAAACTGTACCTATCTTAG 741 0.4035 MQMRAYGEEATLLLRACAYIIIDRKNVPINCQSWANILKSYKQDCYNILKAPNTIAVHHCLFFMGRKYRSNKIKFWDSNFKPSSCTGDLVITNIPCGLLEYQWSSFVDYHLWSNYQELNPGHDEDRSKLYITTHKKKRCLLGKTILKGRFEMLSLSGSFMLSESSGSSTDGRVIGGVVAGVLIAASPGGAYTGQTLTPLGHCTCHWNRVTSTNEANSADSEAAVKFKYRSRDASILWDVPCKLYLS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2706g00007 246 CDD DUF296 144 184 IPR005175 -
Gabi2706g00007 246 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 145 187 IPR039605 GO:0003680
Gabi2706g00007 246 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 187 IPR005175 -
Gabi2706g00007 246 SUPERFAMILY AF0104/ALDC/Ptd012-like 143 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2706g00007 Gabi-Chr2706 81048 85633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2706g00007 142 187 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 50.000 3.39e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2706g00007 - - ccaj:109792580 122.864