Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2700g00010 ATGGGAAGACCAAGGTGCTTCTTGGACATATGCATAGGGGAAGAGCTAGAAGGGAGGATATTGGTGGAGCTTTACGACGATGTGGCACCCAAAACTGCTGAGAATTTCAGAGCTCTCTGTACTGGCGACAAAGGCATTGGTCCAAATACAGGGGTGCCTCTCCATTTCAAGGGATCTTGCTTTCATCGTGTTGTTAAAGGTTTTATGATCCAAGGAGGTGATATATCTGCTGGAGATGGCACTGGAGGAGAATCTATATATGGACTGACGTTTGAAGATGAAAATTTTGAGTTGAAGCATGAAAGGAAAGGGATGTTATCAATGGCAAACACCAGTCCTAATACAAATGGGTCTCAGTTTTTTATCTCTACTACCCGAACTTCTCATCTAGATGGTAAGCATGTTGTATTTGGGAAAGTAGTTAAAGGAATGGGAGTGGTCCGTTCTATTGAGCATGTTATGACTGGAGATGATGATCGCCCCCTTCTTGATGTTAAAATTGTGGATTGCGGAGAAATTTCCGAAGGAGAAGATGATGGGATATCTAACTTCTTCAAAGATGGTGATACTTATCCTGATTGGCCAGCAGACCTTGATGAGAGCCCTAATGAACTTGATTGGTGGATGCAGTCAGTTGACTCCATTAAAACTTTTGGCAATGAGCATTACAAGAAACAGGACTACAAAATGGCTCTAAGGAAGTATCGGAAGGCTTTACGTTACCTGGATATTTGTTGGGAGAAAGATGGGATTGATGAAGGTGATAACATAGTTGTATTAATGGCTTTGCAGAGAAAACTTTAG 804 0.4179 MGRPRCFLDICIGEELEGRILVELYDDVAPKTAENFRALCTGDKGIGPNTGVPLHFKGSCFHRVVKGFMIQGGDISAGDGTGGESIYGLTFEDENFELKHERKGMLSMANTSPNTNGSQFFISTTRTSHLDGKHVVFGKVVKGMGVVRSIEHVMTGDDDRPLLDVKIVDCGEISEGEDDGISNFFKDGDTYPDWPADLDESPNELDWWMQSVDSIKTFGNEHYKKQDYKMALRKYRKALRYLDICWEKDGIDEGDNIVVLMALQRKL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2700g00010 267 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 171 IPR002130 GO:0000413|GO:0003755
Gabi2700g00010 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Gabi2700g00010 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Gabi2700g00010 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Gabi2700g00010 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Gabi2700g00010 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Gabi2700g00010 267 FunFam Peptidyl-prolyl cis-trans isomerase D 1 178 - -
Gabi2700g00010 267 Gene3D - 1 179 IPR029000 -
Gabi2700g00010 267 Gene3D - 203 264 - -
Gabi2700g00010 267 SUPERFAMILY Cyclophilin-like 3 176 IPR029000 -
Gabi2700g00010 267 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 173 - -
Gabi2700g00010 267 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 172 IPR002130 GO:0000413|GO:0003755
Gabi2700g00010 267 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2700g00010 Gabi-Chr2700 124787 128005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2700g00010 14 170 U-box Gene Family AT5G67530 43.038 1.58e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2700g00010 K05864 - gmx:100813496 489.189