Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2700g00005 ATGACTAATTGCAGACTTGTCATCAACTTCAGTTTCTTCTTATGTTTGGTTGTTAACTTGGCTCCCCTTGTTCTTATGTTTCCCTTTACTAATAACCAGCTTGGCTACAATTTCTACGACACAACATGCCCCAAGTTTCCCATGATTGTTAGATCTAGTGTTTGGTCGGCCATTAGAAATGAAACCAGAATGACCGCATCCCTCCTTCGGTTGCACTTTCATGATTGCATCGTAAATGGCTGTGATGGTTCGGTGCTTCTTGATGATACACCAGATTTCACGGGAGAAAAGAATGCTTTTCCTAATAAAAATTCACTTCGAGGGTTTGAAGTGATTGATAACATCAAAGAAGAAGTAGAGAGGAGTTGTCCATCAACAGTTTCCTGTGCTGATATATTGGCCTTTGCAGCTAGGGAAGCTGTTTCTATGTCTTGGGGTCCTTTTTGGCCTGTTGCATTAGGCCGACGAGATGCAACAACAACCACTCAGGATGCAGCTAATCAACAGGTTCCCTCACCTTTTGACTCACTAGAAATAATCACTGCAAAGTTCACTTCAAAGGGTCTTGACTTGAACGATGTTGTGATCCTTTCAGGAGCACATACAATTGGTTTTGCCCATTGCTCCACCTTCCAAAGGAGACTTTTTGACTTCAAAAGCTCTGGCAAACCTGATCCTGTGCTTGACCCTTTACTCCTCTCAAAATTGCAAAGCATGTGTCCCAATAAAGACACTTCAAACAGCAACATTCTAGCACCCCTTGATGTTACAAGTTCTTGTACTTTTGACAATGCGTATTACACAAACCTTGTAAGCAACAAAGGGCTCCTTGAATCTGACCAAGCACTAAACGGGGATCCAAAGACTGCTGCTAAGGTTAATTATTACAGCACCAACCGATTTTCCTTCTATAATGATTTTTCTGCATCCATGGTGAAGCTTAGTAATGTGGGAGTACTTACAGGGCAAAATGGACAAATCAGAAAGAAATGTGGCTCAGTAAACTAA 1008 0.4157 MTNCRLVINFSFFLCLVVNLAPLVLMFPFTNNQLGYNFYDTTCPKFPMIVRSSVWSAIRNETRMTASLLRLHFHDCIVNGCDGSVLLDDTPDFTGEKNAFPNKNSLRGFEVIDNIKEEVERSCPSTVSCADILAFAAREAVSMSWGPFWPVALGRRDATTTTQDAANQQVPSPFDSLEIITAKFTSKGLDLNDVVILSGAHTIGFAHCSTFQRRLFDFKSSGKPDPVLDPLLLSKLQSMCPNKDTSNSNILAPLDVTSSCTFDNAYYTNLVSNKGLLESDQALNGDPKTAAKVNYYSTNRFSFYNDFSASMVKLSNVGVLTGQNGQIRKKCGSVN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2700g00005 335 Pfam Peroxidase 50 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 ProSiteProfiles Plant heme peroxidase family profile. 33 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Gabi2700g00005 335 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Gabi2700g00005 335 Gene3D Peroxidase, domain 2 171 314 - -
Gabi2700g00005 335 SUPERFAMILY Heme-dependent peroxidases 33 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 FunFam Peroxidase 171 314 - -
Gabi2700g00005 335 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 PANTHER PEROXIDASE 72-RELATED 31 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2700g00005 335 FunFam Peroxidase 37 180 - -
Gabi2700g00005 335 CDD secretory_peroxidase 33 334 IPR033905 GO:0004601|GO:0042744
Gabi2700g00005 335 Gene3D - 37 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2700g00005 Gabi-Chr2700 94727 97269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2700g00005 34 332 Peroxidase AT1G49570 61.794 6.40e-136 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2700g00005 K00430 - qsa:O6P43_011686 467.233