Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2700g00001 ATGGAAAATTGTGAAAATCTCGCTAAAAGTGTTATTGAGACACAATCTCCAGGATCATCTACTGTTTTGGTTGCACGTTTTGATGGTCAGACGGATCACTCACAGATAACAACTATTGAAGACATTGACATGAGTGAGAGTTTAATATATTGTGATAAGGTTGTTGATTTGGAGAAAGACAATGATGATTTTGGAGAATATAATCAGTGTGAAACTATAGAAGACGAAGATGGTGATTGTAGGGAAGATAACGTGCATGAAATTGTGGGAGCTGATGATATGAGCTTCACGGATACCCCCATTCTGGGTAGAGTCTTTAAGACAATAGAAGAAGCTTATGAATTTTATAATGATTATGCAGAAAGTAAAGGATTTGGAATACGTAAGCACTGGTGTAATAGGAGTACAAAAACACAACAGCCATTTAGGTGGAATTATGTAAGTGCAAAGCAAGGTGTGAAACGACTTCATGATAAAAGAGTTGATGTTGACAGTGTCAAAAGGCGAAGGGAAACAAGGACTGATTGTTCAGCGATGTTACAAATAAAGTTGGTTGATGGATCATGGGTTGTGGAAAAATTCAATGATACACACAACCATCCATTGATTAACACTCCTACAAAGGTGAAGAAGTTTTTTTCTCATAATGATTTACGACGCTCAGGCATTACTAAGTCGTTGGTTTCTAAGCTTTATCAGGAGGGTTTAACATCTTCAAAAATCTCAAAGGTGGTTAACGCTATGAACGAAGATGTTAATATTACTCCAATTCAAATTAGCACTATTATATCAAGCCAGAGACATAGTAATGTAGGCCGAGAATGCCAGGGCATTGTCAAACACTTTCAAAGGAAGTCTGTTGTTGATAGAGATTTTTATTTTGATATGCATCTAGTGGATGATGGTACATTAAGAAGTGTCTTCTGGGCGGATGGTAGGTCAAGAGCTGCATATGCCCAATTTGGTGAAGTCCTTGTGTTTGATGTGACATACAGAACAAACAAGTTCAAGTTTCCTTTTGCCCCTTTCGTGGATGTTAATCACCATGGGCAATCAATTTTATTTGCTGCTGCCTTGTTAGAAGATGAAACAGAAGCAACCTTTACTTGGTTGTTTGAACAATTTCGAACATGTATGTTTGATAGGTCTCCGGTTGCTATTATAACTGATCAAGACAAAGCTATGGGAAAATCAATTGCTAAGATATTTTCAGGAGCTCGACATCGTTTTTGTGCATGGCACCTGAAAAAACATGTTATGAAGCATAGTCAAGCACTTCGCGCACAATTTAAAGATAGTTTTGATGTTGACTTCCGTGAGTGGTATAAAAGTCAAAACATCGATGAGTTTGAAGGCAAGTGGGAAGCATTAAAGAATAAATATGATATTAGAGCAGGTAGTTGGTTGGCTAACATGTATACTTCACGTCATCATTGGGCAAAGGCATACTTGAAAGATACATTTTTTGCCGGAATGACCACAAGTGGTCGAAGTGAGAGCATGAATTCTTTTTTTGATGGATATGTCAACTCTAACACAATGTTAAATGACTTTGTCATCCAATACGACAAAGCAATCAAGTCTAGGAGGGATGCAGAAGAAGATGAAGATTTCAAAACAATAAATACGAAGGCAATTTTGGAGACTGCTCACCCAATCGAAGCAACAGCCGGAGAGCGCTACACAAGAAAAATGTTTGAGATCTTCAAAAAGGAGTGGAAGGTTGCCATTGGTGATTATTTTCATGAAAAGATTTCAACAGACAATAAATGTACCAAGTACCGGGTGGGATCTCGTGAAGTTGATAAAAAGTGGTGGGCAATTGTCGACTACCATTTGGAAGAAACATTCACAGCTCATTGTTCTTGTGCAAAATTTGAAACTATGGGGATTTTGTGTAGACATACTCTATACATCATGAAGAAGAAACAAATAATGACCCTTCCTGAAAAATATATTTTGTCTAGGTGGACAATGGATGCAAGTTATAGGGTTGGAGAATTTGCAGGCATTCATGTTGAAACAACTACTAATGAAGTTAGTGCATTGTCTTTGTGGTTGGTTCAATCTAAATTCACTATGGCTGTTTCTGAAGCAAGAGATTCTATTTCTGAGGTTAGAAGGCTTGATGCTATGATTTCTGAATTTCTACAACTACAATTGGAAAGAAAGAAAAAGGCATCTGAAGATGAAATGGTTCCCACAATTTATCCTTCACTAGTTCCCGATAATGTTACACAAGTTTCACACATTAATGATGTGCGTGATCCTACTCAACTAGTCAAAACTAAGGGGCGTCCAAGGGTTGCTTCACGTATAAAATCTAGCATGGAAATGTCCACAAAACAACAAAGGACTTGCAGTTATTGTCAAGGAAAAGGTCATTATAAGACTGGTTGTCAGAAGCTAAAGGTTACTATATCCCCAGAAGTGACTTCGAGAACAGTAAACAGGTTCATTATAGCTGAACTTGTGAGAGGCTGGCAGAGGCAAAGTATAAGAAAAAGTAGAGGAGAGACCAAAGCTGAACCATCCTCGGAGCTTATTGGTAATAATAATAGCAGTATTAAGGGACCAGTACAAATTGACAATTCAGAGGATGATGGAGATGAACCACTTGTGCTTTTATTTGTAATTTTATCGTATCTTGGTATTGTTTCACTGGTAGAGATAACATAA 2679 0.3748 MENCENLAKSVIETQSPGSSTVLVARFDGQTDHSQITTIEDIDMSESLIYCDKVVDLEKDNDDFGEYNQCETIEDEDGDCREDNVHEIVGADDMSFTDTPILGRVFKTIEEAYEFYNDYAESKGFGIRKHWCNRSTKTQQPFRWNYVSAKQGVKRLHDKRVDVDSVKRRRETRTDCSAMLQIKLVDGSWVVEKFNDTHNHPLINTPTKVKKFFSHNDLRRSGITKSLVSKLYQEGLTSSKISKVVNAMNEDVNITPIQISTIISSQRHSNVGRECQGIVKHFQRKSVVDRDFYFDMHLVDDGTLRSVFWADGRSRAAYAQFGEVLVFDVTYRTNKFKFPFAPFVDVNHHGQSILFAAALLEDETEATFTWLFEQFRTCMFDRSPVAIITDQDKAMGKSIAKIFSGARHRFCAWHLKKHVMKHSQALRAQFKDSFDVDFREWYKSQNIDEFEGKWEALKNKYDIRAGSWLANMYTSRHHWAKAYLKDTFFAGMTTSGRSESMNSFFDGYVNSNTMLNDFVIQYDKAIKSRRDAEEDEDFKTINTKAILETAHPIEATAGERYTRKMFEIFKKEWKVAIGDYFHEKISTDNKCTKYRVGSREVDKKWWAIVDYHLEETFTAHCSCAKFETMGILCRHTLYIMKKKQIMTLPEKYILSRWTMDASYRVGEFAGIHVETTTNEVSALSLWLVQSKFTMAVSEARDSISEVRRLDAMISEFLQLQLERKKKASEDEMVPTIYPSLVPDNVTQVSHINDVRDPTQLVKTKGRPRVASRIKSSMEMSTKQQRTCSYCQGKGHYKTGCQKLKVTISPEVTSRTVNRFIIAELVRGWQRQSIRKSRGETKAEPSSELIGNNNSSIKGPVQIDNSEDDGDEPLVLLFVILSYLGIVSLVEIT 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2700g00001 892 MobiDBLite consensus disorder prediction 845 861 - -
Gabi2700g00001 892 Pfam MULE transposase domain 324 417 IPR018289 -
Gabi2700g00001 892 ProSiteProfiles Zinc finger SWIM-type profile. 611 644 IPR007527 GO:0008270
Gabi2700g00001 892 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 92 690 IPR031052 GO:0006355
Gabi2700g00001 892 MobiDBLite consensus disorder prediction 833 863 - -
Gabi2700g00001 892 Pfam FAR1 DNA-binding domain 114 203 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2700g00001 Gabi-Chr2700 9263 13037 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2700g00001 MULE 3.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2700g00001 - - lsv:128127215 735.332