Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2699g00023 ATGGGAAGGCCACCTTGTTGTGACAAAGAAGGTGTCAAGAAAGGTCCTTGGACACCTGAAGAAGATATCATATTGGTCTCTTATATACAGGAACATGGTCCTGGCAATTGGAGGGCTGTTCCCACCAAAACAGGATTGTCAAGATGCAGTAAGAGTTGTAGACTTAGATGGACGAATTACCTGAGGCCAGGAATCAAACGGGGTAACTTCACAGAACAAGAGGAGAAGATGATAATCCATCTTCAAGATCTTTTAGGAAACAGATGGGCTGCCATAGCTTCATACCTTCCACAAAGAACAGATAATGACATAAAAAACTATTGGAACACCCATTTGAAAAAGAAGCTCAAGAAATTGCAAACAGGTTCTGAAGGCAACTTGGGAGAAGGGTTTTCAACATCACAACCAATTCCTAGAGGTCAGTGGGAAAGAAGGCTCCAAACTGATATCCATATGGCCAAGAGAGCTCTTAGTGAAGCACTTTCACCAGAGAAACCATCTTGTTTATCTGTATCAAACCCTTCCAATAGTAGCTTCTTCTCTTCCACTAAACAAACCCAATCTTTGTGCTATGCTTCAAGCGCTGAGAACATAGCTCGTTTGCTGAAAGGGTGGATGAAAAACCCACCAAAGTCCTCTTGCACTAACTCAGTTGTGACTCAGAATTCCTTCAACAACATAGCTGCCGGAGGGACTGATACTGCTTCAAGTGAAGGAAGCCCAAAGGGAAGCAGTGCTGAATTGTCAGAGACTTTTGAATCCTTGTTTGGTTTTGAGTCTTTGGAGTCTTCAACTTCTGAGTTTTCACAATCCTTGTCACCTGAGGCTACTGTTTTACAAGATGAAAGCAAGCCTGATATTGGTGCAGAAATGCCATTCTCTTTGCTTGAAAAATGGCTTCTAGATGATGCTGGTTGCCAAGAGAAAGTTACATGTGGTGGTGATCCCCCAGTTTTTCTACATTAG 966 0.4255 MGRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQTGSEGNLGEGFSTSQPIPRGQWERRLQTDIHMAKRALSEALSPEKPSCLSVSNPSNSSFFSSTKQTQSLCYASSAENIARLLKGWMKNPPKSSCTNSVVTQNSFNNIAAGGTDTASSEGSPKGSSAELSETFESLFGFESLESSTSEFSQSLSPEATVLQDESKPDIGAEMPFSLLEKWLLDDAGCQEKVTCGGDPPVFLH 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2699g00023 321 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 240 - -
Gabi2699g00023 321 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gabi2699g00023 321 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gabi2699g00023 321 CDD SANT 16 61 IPR001005 -
Gabi2699g00023 321 FunFam MYB-related transcription factor 13 66 - -
Gabi2699g00023 321 FunFam Transcription factor MYB30 68 126 - -
Gabi2699g00023 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Gabi2699g00023 321 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gabi2699g00023 321 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Gabi2699g00023 321 CDD SANT 69 111 IPR001005 -
Gabi2699g00023 321 SMART sant 66 114 IPR001005 -
Gabi2699g00023 321 SMART sant 13 63 IPR001005 -
Gabi2699g00023 321 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gabi2699g00023 321 Gene3D - 68 128 - -
Gabi2699g00023 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Gabi2699g00023 321 Gene3D - 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2699g00023 Gabi-Chr2699 296727 298348 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2699g00023 1 303 MYB Transcription Factor Family AT5G62470 53.561 1.58e-106 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi2699g00023 Myb_DNA-binding 6.7e-16 CL0123