Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2699g00014 ATGATACTGTTTGTCATGGCTATGCCAATTCCCAAAAATATGGTGGTAGGAGCTTTGTGCAGTATGCTTGTTATATCTTGGACTAGTTTCTGCATTGCAATTGTGTTTGATGCAGCATTTGAATTATCACCACTAGACTTAGAAGCACAAGCTCTGATTGAAAGTGGGTGGTGGAGTGACTTCACTAACTATGTTCCAAGTCATTGCCAGTGGCCAGGCATTGCATGCAATAGTGCTGGAAGCATTACAAACATTTCTTTGCCTGCTGAAACCCAATTGGGAGACAAGTTCAGGAGATTCAACTTCTCTTCATTCCCAAACCTTGTCCACCTCAATCTTGCTGCACATGGGATCACTGGAAGTATCCCAAATGAACTAGGTACTCTTTCCAAACTTGCTCATCTTGACCTATCTTCTAATGATATTCAAGGACATATTCCATCAAACATTTGGAATCTAAGGAATCTGGTGATCCTGAACCTGGCTAGTAACAGGCTTAGTGGTTCAATTCCACCTTCTGTGGGTCAGTTGACTAAGTTGACCTATTTATTTCTTGATACCAATCTGATTAGTGGTCCTATCCCTCCAGAGTTAGGAAAGCTGAAGAATCTGATTCAATTGGGTCTAAATAATAATGGTTTTGTTGGTCCAATACCTGCTGAGATTGGTCTATTGAACAATTTGAAATATCTGTCTCTCAGTGTGAACAATTTAAATGGTACCATACCTTTGGAAATAGGAAATTTGAACAATCTTGCATATCTTGATCTTAATACTAACAATCTCACTGGTGAAATACTTTCAGTTTTACATAATCTAACCAATTTGACTGAACTAAACTTGTCCAACAATGAGATTTCTGGTTTGGTGCCACGAGAGTTTACTCAATTGACCCAACTCGAGTATCTGAAAATTTCAGAAAACAAAATTTTTGGTGCATTACCTCCTGAAATTGGAAAACTGTCCAAACTCTTGGTTTTAGACCTGTCTAGAAACATGTTGACTGGAGAAATCCCAGTCAGTCTTTCTACATGCACTAAACTGCAGGTGTTGACTTTGAGCCATAACAAACTAACCGGAAGCATTCCCTCTCAGATTGGTGATATTGTTACACTTGCTTCAATTGATTTGAGTCATAACTTAATTAAGGGAGAAATACCTTATCAACTTGGGAATGTGAAATACATTAGGGTCTTGGATCTAAGTTGTAATGAACTCACTGGAAAGATTCCAAGTTCCCTAGTATTGCTTCGTAGTGTAAACTTGTCCTACAATTCTCTAGAGGGTGAGATCCCATTTGGTGTCCAAGATTCTTATGCTCCTGATGCATTCATTTGCAATGAGTGTTTATCTAGCCGCAGCACCCCCTTTCCTACTTGTGACTCCTCTTCTTCCAATAGAGTCAAGACCCTTATGAAGATTTTCCTTCCTCTCACTGCTTTTCTTGCTCTTCTATGTATCATGTATGTGTTCTTCCGCTGGTGTAAGGCTAAGAGTTCCAAGTCTGTGGCAAAAGCAATGAAGAATGGTGACCTGTTTTCAGTATGGAACTATGATGGTAAAATTGCTTATAATGACATAATTGAAGCAACGGAGGGTTTTGACATCAAATATTGCATAGGAACTGGTGGTTATGGTGATGTTTACAGAGCACAGCTACCTAGTGGTAGAGTAGTGGCCTTGAAGAAACTCCACAATTTAGAAGCCAACGAACCAGAACTCCGCAGGATTTTCAAGAATGAAGTGAGAATGTTGACAAAAGTAAGGCATAGAAATATTGTGAAGCTTTATGGATTCTGCTTGCACAACAGATGCATGTTTCTGGTTTTGGAATACATGGAAAGGGGAAGCTTGTATTATGTTCTACACAATCACATTGAAGCTGTGGATTTGGATTGGAACAAGAGGATTAACATTGTGAAAGGAATAGCATATAGCTTATCATACCTTCATCATGATTGCAAGCCAGCAATCATTCACAGAGATGTAACAACCAAAAATGTTCTCTTGAATTTAGAAATGGAGGCTTGTCTCTCTGACTTTGGCATAGCAAGACTTCGAAATTCTAGTTCCTCCAATCGAACAGTACTTGCTGGCACTTACGGATATCTTGCACCAGAGAAATGTGATGTCTACAGTTTTGGAGTGGTTGCTCTTGAAATTATCATGGGAAGGCATCCTGAAGAGATTATTTCTTCATTAAGATTTGCATCCACTAGAAGTATTCTCCTTAAAGATATATTAGACCCCAGATTATTATCCACCAACAATCAACAATATGCTCAGAGTTTGGATCGTATAGCAACGCTAGCCTTTGCATGTCTTCATTCTCAGCCAAGGTCTAGACCAACAATGCAAACAGTGTGTGACAAATTTCTCACCGGAAAGCCCAGATTAACAAAACCTTTTGAAGAAATTTCAATAAGGCAGATGGTAAATCAGGAATTGTAA 2451 0.3896 MILFVMAMPIPKNMVVGALCSMLVISWTSFCIAIVFDAAFELSPLDLEAQALIESGWWSDFTNYVPSHCQWPGIACNSAGSITNISLPAETQLGDKFRRFNFSSFPNLVHLNLAAHGITGSIPNELGTLSKLAHLDLSSNDIQGHIPSNIWNLRNLVILNLASNRLSGSIPPSVGQLTKLTYLFLDTNLISGPIPPELGKLKNLIQLGLNNNGFVGPIPAEIGLLNNLKYLSLSVNNLNGTIPLEIGNLNNLAYLDLNTNNLTGEILSVLHNLTNLTELNLSNNEISGLVPREFTQLTQLEYLKISENKIFGALPPEIGKLSKLLVLDLSRNMLTGEIPVSLSTCTKLQVLTLSHNKLTGSIPSQIGDIVTLASIDLSHNLIKGEIPYQLGNVKYIRVLDLSCNELTGKIPSSLVLLRSVNLSYNSLEGEIPFGVQDSYAPDAFICNECLSSRSTPFPTCDSSSSNRVKTLMKIFLPLTAFLALLCIMYVFFRWCKAKSSKSVAKAMKNGDLFSVWNYDGKIAYNDIIEATEGFDIKYCIGTGGYGDVYRAQLPSGRVVALKKLHNLEANEPELRRIFKNEVRMLTKVRHRNIVKLYGFCLHNRCMFLVLEYMERGSLYYVLHNHIEAVDLDWNKRINIVKGIAYSLSYLHHDCKPAIIHRDVTTKNVLLNLEMEACLSDFGIARLRNSSSSNRTVLAGTYGYLAPEKCDVYSFGVVALEIIMGRHPEEIISSLRFASTRSILLKDILDPRLLSTNNQQYAQSLDRIATLAFACLHSQPRSRPTMQTVCDKFLTGKPRLTKPFEEISIRQMVNQEL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2699g00014 816 Gene3D Ribonuclease Inhibitor 194 291 IPR032675 -
Gabi2699g00014 816 Gene3D Ribonuclease Inhibitor 45 193 IPR032675 -
Gabi2699g00014 816 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 211 793 - -
Gabi2699g00014 816 ProSitePatterns Protein kinases ATP-binding region signature. 540 562 IPR017441 GO:0005524
Gabi2699g00014 816 FunFam Os07g0541700 protein 613 700 - -
Gabi2699g00014 816 Gene3D Ribonuclease Inhibitor 292 370 IPR032675 -
Gabi2699g00014 816 Gene3D Ribonuclease Inhibitor 371 472 IPR032675 -
Gabi2699g00014 816 PRINTS Leucine-rich repeat signature 321 334 - -
Gabi2699g00014 816 PRINTS Leucine-rich repeat signature 276 289 - -
Gabi2699g00014 816 ProSiteProfiles Protein kinase domain profile. 534 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2699g00014 816 Gene3D Transferase(Phosphotransferase) domain 1 613 802 - -
Gabi2699g00014 816 FunFam Leucine-rich repeat receptor protein kinase MSP1 496 612 - -
Gabi2699g00014 816 Gene3D Phosphorylase Kinase; domain 1 495 612 - -
Gabi2699g00014 816 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 245 464 - -
Gabi2699g00014 816 SUPERFAMILY RNI-like 101 438 - -
Gabi2699g00014 816 Pfam Protein kinase domain 538 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2699g00014 816 ProSiteProfiles Leucine-rich repeat profile. 275 296 IPR001611 GO:0005515
Gabi2699g00014 816 Pfam Leucine rich repeat 269 310 IPR001611 GO:0005515
Gabi2699g00014 816 Pfam Leucine rich repeat 318 358 IPR001611 GO:0005515
Gabi2699g00014 816 Pfam Leucine Rich repeat 130 143 IPR001611 GO:0005515
Gabi2699g00014 816 SMART LRR_typ_2 321 345 IPR003591 -
Gabi2699g00014 816 SMART LRR_typ_2 153 177 IPR003591 -
Gabi2699g00014 816 SMART LRR_typ_2 346 369 IPR003591 -
Gabi2699g00014 816 SMART LRR_typ_2 225 249 IPR003591 -
Gabi2699g00014 816 SMART LRR_typ_2 129 152 IPR003591 -
Gabi2699g00014 816 SMART LRR_typ_2 273 296 IPR003591 -
Gabi2699g00014 816 SMART LRR_typ_2 297 320 IPR003591 -
Gabi2699g00014 816 ProSitePatterns Tyrosine protein kinases specific active-site signature. 658 670 IPR008266 GO:0004672|GO:0006468
Gabi2699g00014 816 FunFam Nuclear pore complex protein NUP107 43 196 - -
Gabi2699g00014 816 SUPERFAMILY Protein kinase-like (PK-like) 516 790 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2699g00014 Gabi-Chr2699 150549 153455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2699g00014 102 706 Receptor kinase-like Gene Family AT4G08850 36.792 4.34e-135 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gabi2699g00014 Pkinase 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2699g00014 - - aprc:113863342 1165.21