Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2699g00007 ATGGGTTATCTGAGCAAAGCTTCCAAGACCTTGAGACAGTCAAAATACCTATCCGTTTCCCTGTTATGCAATTTGACCCCATTAACCAACAGAATAACCCATCAACGCTTTGCTCTGACCCGTGCACTGTTTTGTTCCCAGTCACGCCAAAATAGCGCCAAAGAGAAAAGCCCCATAGATTTGAGTCAGTACCCTCCAGAGCTCGTCAGAAACTTCTCAATCATTGCGCACGTTGATCATGGCAAGTCCACCCTTGCTGATCGTCTTCTAGAACTCACTGGAACCATTAAGAAAGGTCACGGCCAGCCTCAGTATCTTGATAAATTGCAGGTGGAGAGAGAAAGGGGAATCACAGTTAAAGCCCAGACAGCAACAATGTTCTATAAGAACAGCATAAATGTTGATAATTGTAGTGATGGAAAGGAGTCACCTAAATTTTTGCTGAATCTTATTGACACTCCTGGGCATGTGGATTTTAGTTATGAAGTGTCAAGGTCACTGGCAGCTTGTCAGGGTGTGCTTCTTGTTGTTGATGCTGCTCAAGGAGTCCAGGCACAAACCGTTGCTAACTTTTACCTTGCATTTGAGTCTAACCTTACAATTGTACCTGTCATAAACAAGATTGACCAGCCAACTGCTGATCCAGATCGTGTTAAAGCCCAATTGAAATCGATGTTTGATCTTAACCCAAGTGATGCACTGCTAACATCTGCTAAAACTGGGAAGGGTCTTGAGCAAGTTCTTCCTGCAGTCATAGAGCGCATACCCCCACCTCCTGGGAGGAGTGATTCTCCTCTACGCATGCTTTTACTTGATTCATATTATGATGAATACAAAGGGGTAATATGCCATGTTGCTGTTGTTGACGGTGCCCTGCGCAAAGGGGATAAGATTTCTTCTGCAGCTACTGGTCAGTCATATGAAGCTTTGGATATAGGCATCATGCATCCTGAACTCACACCTACTGGAATCTTGCTTACTGGACAAGTTGGTTATGTTGTAAGTGGCATGCGGTCAACCAAAGAGGCACGTGTTGGAGATACAATTTACCATGCTCGGAGCATGGTAGAGCCACTTCCAGGCTTCAAGCCAGCAAAACATATGGTATTTTCTGGTCTTTATCCAGCTGATGGATCTGATTTTGAAGCACTCAATCATGCAATAGAGAGGCTGACATGCAATGATGCCAGTGTCTCTATTACTAAAGAAAGTAGCACTGCTCTAGGTCTGGGGTTCAGGTGTGGATTTTTAGGCCTTCTACACATGGATGTTTTTCATCAACGACTTGAACAGGAGTATGGAGCTCATATTATCTCAACTGTTCCTACTGTGCCATATATATTCGAGTATTCTGATGGAAGCAAATTAGAAGTTCAAAATCCTGCTTCATTACCCTCTAATCCCAAGCAACGAGTGACAGCCTGTTGGGAACCTACAGTATTAGCTACTATAATCACTCCTAGTGAGTATGTGGGACCTGTTATTACCCTTGTCTCTGAGCGTAGGGGTCAGCAATTGGAGTACTCATTCATTGACAGTCAACGGGTATTCATGAAGTATCGCCTGCCTTTGAGGGAAATCGTCATTGACTTTTATAATGAATTGAAGAGTATAACATCAGGCTATGCATCATTTGATTATGAGGATTCAGACTATCAACAATCTGATCTAGTGAAACTTGATATTCTCTTGAATGGTCAACCAGTTGATGCGATGGCAACCATTGTTCATAACATGAAAGCATATCGTGTTGGGCGTGAACTGGTGGAGAAATTGAAGAAAGTCATAGACAGGCAAATGTTTGAGATAATCATACAAGCTGCCATTGGGTCAAAAATTATAGCAAGGGAGACGATTTCCGCACTGAGGAAAAATGTTCTTGCCAAGTGTTATGGTGGTGATGTTTCTCGAAAGAGGAAGCTATTGGAGAAGCAAAAGGAAGGAAAGAAGCGAATGAAACGTGTTGGTTCTGTTGATATACCACAAGAAGCATTCCATGAACTATTGAAGGTTTCATAG 2019 0.4274 MGYLSKASKTLRQSKYLSVSLLCNLTPLTNRITHQRFALTRALFCSQSRQNSAKEKSPIDLSQYPPELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKNSINVDNCSDGKESPKFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVINKIDQPTADPDRVKAQLKSMFDLNPSDALLTSAKTGKGLEQVLPAVIERIPPPPGRSDSPLRMLLLDSYYDEYKGVICHVAVVDGALRKGDKISSAATGQSYEALDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYHARSMVEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKESSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHIISTVPTVPYIFEYSDGSKLEVQNPASLPSNPKQRVTACWEPTVLATIITPSEYVGPVITLVSERRGQQLEYSFIDSQRVFMKYRLPLREIVIDFYNELKSITSGYASFDYEDSDYQQSDLVKLDILLNGQPVDAMATIVHNMKAYRVGRELVEKLKKVIDRQMFEIIIQAAIGSKIIARETISALRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2699g00007 672 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 107 122 IPR031157 -
Gabi2699g00007 672 Gene3D Translation factors 262 359 - -
Gabi2699g00007 672 Gene3D - 67 260 IPR027417 -
Gabi2699g00007 672 FunFam Elongation factor 4 66 260 - -
Gabi2699g00007 672 CDD lepA_C 477 556 IPR035654 -
Gabi2699g00007 672 NCBIfam translation elongation factor 4 69 671 IPR006297 GO:0005525
Gabi2699g00007 672 PRINTS GTP-binding elongation factor signature 71 84 IPR000795 GO:0003924|GO:0005525
Gabi2699g00007 672 PRINTS GTP-binding elongation factor signature 149 159 IPR000795 GO:0003924|GO:0005525
Gabi2699g00007 672 PRINTS GTP-binding elongation factor signature 201 210 IPR000795 GO:0003924|GO:0005525
Gabi2699g00007 672 PRINTS GTP-binding elongation factor signature 114 122 IPR000795 GO:0003924|GO:0005525
Gabi2699g00007 672 Pfam Elongation factor Tu GTP binding domain 69 256 IPR000795 GO:0003924|GO:0005525
Gabi2699g00007 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 280 IPR027417 -
Gabi2699g00007 672 CDD EF4_III 367 442 - -
Gabi2699g00007 672 SUPERFAMILY EF-G C-terminal domain-like 368 445 IPR035647 -
Gabi2699g00007 672 FunFam Translation factor GUF1, mitochondrial 360 441 - -
Gabi2699g00007 672 FunFam Translation factor GUF1, mitochondrial 261 359 - -
Gabi2699g00007 672 NCBIfam small GTP-binding protein domain 73 247 IPR005225 GO:0005525
Gabi2699g00007 672 Gene3D - 556 630 IPR038363 -
Gabi2699g00007 672 Pfam Elongation factor G C-terminus 477 562 IPR000640 -
Gabi2699g00007 672 Gene3D - 442 555 - -
Gabi2699g00007 672 CDD EF4_II 266 351 - -
Gabi2699g00007 672 FunFam Translation factor GUF1, mitochondrial 442 554 - -
Gabi2699g00007 672 Pfam GTP-binding protein LepA C-terminus 564 670 IPR013842 -
Gabi2699g00007 672 Hamap Elongation factor 4 [lepA]. 65 672 IPR006297 GO:0005525
Gabi2699g00007 672 SUPERFAMILY EF-G C-terminal domain-like 476 570 IPR035647 -
Gabi2699g00007 672 Gene3D Elongation Factor G (Translational Gtpase), domain 3 360 441 - -
Gabi2699g00007 672 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 67 259 IPR000795 GO:0003924|GO:0005525
Gabi2699g00007 672 CDD LepA 70 258 - -
Gabi2699g00007 672 SUPERFAMILY Translation proteins 257 355 IPR009000 -
Gabi2699g00007 672 PANTHER TRANSLATION FACTOR GUF1-RELATED 41 671 IPR006297 GO:0005525
Gabi2699g00007 672 FunFam Translation factor GUF1, mitochondrial 556 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2699g00007 Gabi-Chr2699 66650 71148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2699g00007 69 210 Eukaryotic Initiation Factors Gene Family AT1G56070 39.583 1.33e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2699g00007 K21594 - gmx:100781092 1220.68