Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2699g00006 ATGTCAAAAAAGTCTAGTCCTAGTGGTTCAGAGATAGAAGAGAAGAGAGTTACTTCCATTTTCCGTGAAGATGATTTCTGTGTTCAAGAGGTTAGAAAGGAAGATAAACTCAAATCTGCTACAGCTGAGATGGGTGAGGTGAAAGAAGAAAATGAGAGATTGAAGATGATGCTAGAGAGAGCAGAAAAGGACTACCACTCCCTTCAACTCCGTTTCTTTAACATCCATAACAAAGAAGTTCCTAAGAAAGGTGTAGCTGATTCAGCTACTTCCCATGATGAAACTGAAGAAACTGAGCTTGTGACACTTTGCCTTGGAAGAAGTCCAACTGAGTCTAAGAAGGAATCAAGAATTGGAAACTCTAACAAACCTAAAGATAAAGAAGATCTTGAAGCAAACCTTACTCTTGGATTAGACTCCAAATATCTGTTGTCAATGGAACTGGTGTCTGATTTGAGTCCTATGAACAGCTCAGAAGAAACAAAAGAAGCAGAAGCAGAGGGAACATTGTCAACAAATAAATCAGTAAAAGTGAAGAATGTAAATGATGAAATGTCAGATCAGATGCCTGCCAAGAGAGCCAGGGTATCTGTCAGAGCTAGATGTGATACTCCCACGATGAATGATGGATGCCAGTGGAGGAAATATGGACAGAAGATATCAAAAGGAAATCCATGTCCACGAGCATACTATCGTTGCACAGTTGCACCAGCATGTCCAGTAAGGAAACAGGTGCAAAGATGTGCTGAGGACTTGTCCATCTTAATCACCACATATGAAGGAACTCACAACCACCCACTTCCAGTTTCAGCCACAGCCATGGCATCCACCACTTCAGCTGCTGCTTCCATGCTCTTGTCAGGTTCTTCAACATCTCAACCCACAGGTCACAATTCTACATCTTTTGGAAATTCTCCTTCAGTACTCAATGGTCTTAGATTCAGTCAGCAGTTTGATGAATCAAGAGCAAAACATGTTTTCTTACCAAACCATGCCTCACATTTGTTCCCAACAATCACACTAGACCTGGCTTCCCAACAATTACCTTCAAGCATTGCTTCAAACCCAAGATTTTCTCCAAATTGCCTCAGCTTTTATTCCCCTGAGCCTAACTTCATACCATCATCCATTTGGGGCAAGGGAATCCCTAATAATGGCACAATGCCTATTGACAAAACCCAAATAAGGCCAGTTTTAATGGGAAACCATTTACAAGAACATTTCTATCAACAATGCATGGCAAACCAAACTCCTTCAAGGGATGCATTGGCAGAAACAATAACCAAAGCAATCAGCACAGACCCAAATCTTCGCTCTGCAATAGCTGCAGCAGTATCATCAGTGGTGGGACAAGGATCAAACCAAGGAGGAGGAGAGATTCTAGGTCCAGGGTTGAACTTGAAACATGGGGAACATCCTCAAATGGCTTCATCCAATCCTTTGAACCAGAATGGAAAAGGATGCTTAACAGGCTACATTAAAAGATTGTCCTCTACAAGTTCTCAAGCTGGAAACTTCATGCTTCTCCAACCCCAATTGCCATTTTCTCTCTCCATGAGTAGCACAAGCACACCTCCTTCCATTGTTAATCAGATCAATCATTCAGTTCCAGAAATGAACACACATCATTAG 1632 0.4167 MSKKSSPSGSEIEEKRVTSIFREDDFCVQEVRKEDKLKSATAEMGEVKEENERLKMMLERAEKDYHSLQLRFFNIHNKEVPKKGVADSATSHDETEETELVTLCLGRSPTESKKESRIGNSNKPKDKEDLEANLTLGLDSKYLLSMELVSDLSPMNSSEETKEAEAEGTLSTNKSVKVKNVNDEMSDQMPAKRARVSVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPACPVRKQVQRCAEDLSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPTGHNSTSFGNSPSVLNGLRFSQQFDESRAKHVFLPNHASHLFPTITLDLASQQLPSSIASNPRFSPNCLSFYSPEPNFIPSSIWGKGIPNNGTMPIDKTQIRPVLMGNHLQEHFYQQCMANQTPSRDALAETITKAISTDPNLRSAIAAAVSSVVGQGSNQGGGEILGPGLNLKHGEHPQMASSNPLNQNGKGCLTGYIKRLSSTSSQAGNFMLLQPQLPFSLSMSSTSTPPSIVNQINHSVPEMNTHH 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2699g00006 543 SUPERFAMILY WRKY DNA-binding domain 200 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2699g00006 543 ProSiteProfiles WRKY domain profile. 202 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2699g00006 543 SMART WRKY_cls 207 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2699g00006 543 Pfam WRKY DNA -binding domain 208 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2699g00006 543 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 29 453 IPR044810 GO:0003700
Gabi2699g00006 543 MobiDBLite consensus disorder prediction 105 129 - -
Gabi2699g00006 543 Coils Coil 30 71 - -
Gabi2699g00006 543 Gene3D WRKY domain 192 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2699g00006 543 FunFam probable WRKY transcription factor 31 192 269 - -
Gabi2699g00006 543 MobiDBLite consensus disorder prediction 153 174 - -
Gabi2699g00006 543 MobiDBLite consensus disorder prediction 110 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2699g00006 Gabi-Chr2699 61794 64270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2699g00006 44 526 WRKY Transcription Factor Family AT5G15130 40.943 7.74e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2699g00006 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2699g00006 - - gmx:100792084 654.825