Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2695g00007 ATGGGTGCTCCAAGTTCCCTTTTGAAGGTGGAGGAAATACAAGGAAGAGGGAGGGGAATGGTTGCATCGCAGCCTCTTAAAGCTGGCCAAATTGTCCTCAGAGACTCTCCCATCCTGCTGTATTCTGCATTGCCCTTTATCACACGGTCTTTGTCATCGTCCTCCTCTGCCTCAGCCTGCTGCTTCTGTGACCACTGCTTCAGAACCTTGCCACCATCTTTACAGGGAGATTCTTTATCATCTGCTGTTTTATGCCCTTCTTGTTGCCACCATCGCTTTTGCAGTTCCAGTTGTCTATCAAAGGCAATGAACTCCTCCCATTCTTCTTGGGTTTGTCAAGCATTAACTCGTCTCCAATCCAACTCTCTACTGCTTGAACAGCCCTACGAGCGCCAAATCCAAGCTCGTTTTCTCATTGCTGCCTACAATCTTGCTTATATTTCCCCCTCAGCATTCCAAATTATGCTTTCTCTTCAGGGTTCTCCTGATGATGCCACCATTGCTGCAGCTCAGTTCCTACACCCCCTTATTTCATCCCTCTGCTCATTTGCTCTCATTAGCCCCCAGAATGGAGTTTCTTTGGAACTTACTTCTGCACTTCTGGCCAAGGATAAGTTCAATGCCTTTGGCATAATGCAGCCCTTCTCTGTAGATGATGACCAGAGGTCTGTCAGAGCTTATGGTATTTACCCCTACGCGTCCTTTTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTTGACACTAATCAACCTGATGACAGCCATAATACTGACATTATTATTAGGATGATTCATGATGTTCCCCAAGGCAGGGAGATCTGTTTGAGTTATTTCCCTGTGAATGAAAACTATTCTAGTAGACAAAAGAGATTGATAGAAGACTATGGTTTCACCTGTAATTGTGATCGATGTAATGTCGAATCAAATTGGTCAGATAATGACAGTGTCGAAGATAATGCTGAGGAAGAAGAAGAGGAGGTTATGGATGAGGACCAAAATGAAATTATGGCAGCATCAGACACTGACTATAATACTCATGGAGATAATAATGATTTCCCGCATGCTTATTTCTTTTTAAAATACATGTGTGATAGAACAAATTGCTGGGGAACTTTAGCTCCTCTACCCCCACAGGGTGATACTCCATCTAATGTCATGGAATGTAATGTCTGTGGCAAATTGAAGAGAGACGATGATTTTGATGTTGATAAAGGGCAAGATGGAGCTCCCATGGAGGACTGA 1254 0.4362 MGAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLRDSPILLYSALPFITRSLSSSSSASACCFCDHCFRTLPPSLQGDSLSSAVLCPSCCHHRFCSSSCLSKAMNSSHSSWVCQALTRLQSNSLLLEQPYERQIQARFLIAAYNLAYISPSAFQIMLSLQGSPDDATIAAAQFLHPLISSLCSFALISPQNGVSLELTSALLAKDKFNAFGIMQPFSVDDDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDTNQPDDSHNTDIIIRMIHDVPQGREICLSYFPVNENYSSRQKRLIEDYGFTCNCDRCNVESNWSDNDSVEDNAEEEEEEVMDEDQNEIMAASDTDYNTHGDNNDFPHAYFFLKYMCDRTNCWGTLAPLPPQGDTPSNVMECNVCGKLKRDDDFDVDKGQDGAPMED 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2695g00007 417 Pfam SET domain 17 281 IPR001214 GO:0005515
Gabi2695g00007 417 Gene3D - 126 208 - -
Gabi2695g00007 417 CDD SET_SMYD 206 308 - -
Gabi2695g00007 417 ProSiteProfiles SET domain profile. 6 282 IPR001214 GO:0005515
Gabi2695g00007 417 Gene3D SET domain 19 308 IPR046341 -
Gabi2695g00007 417 SMART set_7 6 288 IPR001214 GO:0005515
Gabi2695g00007 417 SUPERFAMILY SET domain 6 304 IPR046341 -
Gabi2695g00007 417 Coils Coil 317 337 - -
Gabi2695g00007 417 Gene3D - 62 121 - -
Gabi2695g00007 417 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 3 409 IPR044238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2695g00007 Gabi-Chr2695 43727 49161 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi2695g00007 SET 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2695g00007 - - gmx:100783406 701.434