Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2693g00027 ATGGCTTCAACAACCCCTTCTCCAAATGCTTCCCCTTCTGCAGTGCCTCCAGCATCTGCTGGTGTTTTATCACCACCTCCTTCTTCATCTTCCCCACCACCATCACCTCCCAATTCTTCTCAACCCAATCAAACATCCAATTCCTCTGCTCCTCCTCCTTCTGACCCTTCAGCTCCTCCTCCTTCTCCTCCACAGGCAGTGCCTCTAACCCCTCCTCCTTCCCCATCCCTCTCTCCTCCGCCATCACCTACACTGCCGCCAACTAAGTCCCCTCCTTCACCACCAGATTCTCCACCACCGTCAACACCTGCATCTCCAACACCACCAGTTGCAACATCACCCCCACCACTAGCTACCACTGCCCCTCCTCCTGCTGTGACTCCACCTTCCCCTCCAAATTTGTCCCCACCACCTAAAGCAGCTGGTTCCCCTCCTCCTCAATCCTCAGAGGCACCTCCAACAGCAATTCCACCTCCCTCTCAACCGGTTTCGCCATCTCCTCCTCCTCCAGCCAATGTGCCACAGCCACCATCCACCCCTTCTCCTCCTCCACCACATGCAAAGCCTCCGAAAAGTGCTCCTTCACCTCCTTCACTTGCATCCCCTCCATCTGTTTCTGAATCTCCTCCTTCTCCTACTTCTACTGATGTTCCCCCTCCATCCACATTGCCTTCAACTCCTCCTCCAGTCCCTTCAGCTTCTTCACCTCCAGTTTCTTTGCCTGGCCCCCCAGCTAATAAAACAGCTTCCGGGGGTCCAACTGTGTCCCTACCCTCTATTCCAACTGAGAAACCCACTGCTAGACCAACTAATGGTGGCACTGATAATATAATCACAAACACTACACCTTCACATTCAGGAGGGTTAAAAACTGGAGGAGCTGCAGCGATTGGCATCATAATTGGTTTTATTGTTCTCAGCCTTCTTGTTATGGCCGTGTGGTTTGTACAGAAAAAGAAGAAGAAGAAGGAAACAGGACCGAAAGGTGGTTATGCTGTACCTTCTCCATTTGCCTCATCTCAAAATTCAGGTACTTTGTTCTTGAGGCCACAGTCTCCAGCCAACTTTTTAGGTAGTGGCTCAGGTAGTGATTTTGTGTATTCACCATCCGAGCCAGGTGGGGTAAGTAGTTCAAGATCATGGTTCACATATGAAGAACTTATCCAAGCTACAAATGGGTTTTCGGCACAAAATCTGTTGGGAGAAGGTGGATTTGGTTGTGTCTACAAAGGTTTTCTCATAGACGGAAGAGAAGTGGCTGTGAAACAGCTCAAAATTGGTGGTGGGCAAGGGGAACGTGAATTCAGGGCAGAGGTTGAGATTATTAGCCGTGTACATCATCGTCATCTGGTTTCCTTGGTGGGCTACTGTATATCTGAGCATCAAAGATTGCTTGTCTACGACTATGTTCCCAACAATACTCTTCATTACCATCTCCATGTTGAAAACAGACCAGTTCTGGATTGGCCTACCAGAGTCAAGGTTGCTGCTGGTGCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGTATTATTCATCGAGACATTAAGTCATCAAACATCCTTCTTGATCACAACTTTGAAGCTCAAGTTTCAGACTTTGGGCTTGCAAAATTGGCATTGGATTCAAATACGCACATAACTACACGTGTAATGGGAACCTTTGGGTACATGGCACCAGAGTATGCAACAAGTGGGAAATTGACTGAAAAATCTGATGTATATTCCTTTGGGGTTGTTCTTTTGGAGCTAATTACAGGTCGAAAGCCTGTAGATGCCTCTCAGCCAATTGGTGACGAGAGCCTGGTTGAATGGGCTCGGCCTCTGTTGAGCGAAGCACTTGATAATGAGGACTTTGATATTTTGGTGGATCCAAGGCTAGGAAAGAACTATAATAGAAATGAAATGTTTCGGATGATTGAAGCTGCTGCAGCCTGCGTGCGTCACTCTTCAATAAAGAGGCCACGGATGAGTCAGGTAGTGAGAGCCTTAGATTCATTAGATGAATTTTCAGATCTGAATAATGGAATGAAACCAGGGCAGAGTTCAGTGTTTGATTCAGCACAGCAATCTGCACAAATCAGAATGTTTAGGAGGATGGCTTTTGGGAGCCAAGATAGTTCCACTTACTTTAATGAGTCTCACAGTAGCTGGAGAAGCAGAGATCATGACTCAACAACTTTCCTCACCCAAAATAAATCTGGGCCCTGGAACATTTCACATGACTAG 2238 0.475 MASTTPSPNASPSAVPPASAGVLSPPPSSSSPPPSPPNSSQPNQTSNSSAPPPSDPSAPPPSPPQAVPLTPPPSPSLSPPPSPTLPPTKSPPSPPDSPPPSTPASPTPPVATSPPPLATTAPPPAVTPPSPPNLSPPPKAAGSPPPQSSEAPPTAIPPPSQPVSPSPPPPANVPQPPSTPSPPPPHAKPPKSAPSPPSLASPPSVSESPPSPTSTDVPPPSTLPSTPPPVPSASSPPVSLPGPPANKTASGGPTVSLPSIPTEKPTARPTNGGTDNIITNTTPSHSGGLKTGGAAAIGIIIGFIVLSLLVMAVWFVQKKKKKKETGPKGGYAVPSPFASSQNSGTLFLRPQSPANFLGSGSGSDFVYSPSEPGGVSSSRSWFTYEELIQATNGFSAQNLLGEGGFGCVYKGFLIDGREVAVKQLKIGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHVENRPVLDWPTRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDHNFEAQVSDFGLAKLALDSNTHITTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLSEALDNEDFDILVDPRLGKNYNRNEMFRMIEAAAACVRHSSIKRPRMSQVVRALDSLDEFSDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSTYFNESHSSWRSRDHDSTTFLTQNKSGPWNISHD 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2693g00027 745 CDD STKc_IRAK 400 670 - -
Gabi2693g00027 745 MobiDBLite consensus disorder prediction 716 745 - -
Gabi2693g00027 745 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 304 712 IPR047117 -
Gabi2693g00027 745 SMART serkin_6 394 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2693g00027 745 MobiDBLite consensus disorder prediction 249 288 - -
Gabi2693g00027 745 MobiDBLite consensus disorder prediction 19 40 - -
Gabi2693g00027 745 MobiDBLite consensus disorder prediction 52 243 - -
Gabi2693g00027 745 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Gabi2693g00027 745 Gene3D Transferase(Phosphotransferase) domain 1 470 686 - -
Gabi2693g00027 745 Gene3D Phosphorylase Kinase; domain 1 371 469 - -
Gabi2693g00027 745 SUPERFAMILY Protein kinase-like (PK-like) 372 667 IPR011009 -
Gabi2693g00027 745 MobiDBLite consensus disorder prediction 1 288 - -
Gabi2693g00027 745 MobiDBLite consensus disorder prediction 726 745 - -
Gabi2693g00027 745 FunFam proline-rich receptor-like protein kinase PERK8 470 682 - -
Gabi2693g00027 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Gabi2693g00027 745 Pfam Protein tyrosine and serine/threonine kinase 397 667 IPR001245 GO:0004672|GO:0006468
Gabi2693g00027 745 ProSiteProfiles Protein kinase domain profile. 394 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2693g00027 745 FunFam Proline-rich receptor-like protein kinase PERK8 366 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2693g00027 Gabi-Chr2693 308668 316210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2693g00027 263 726 Trihelix Transcription Factor Family AT5G38560 70.675 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gabi2693g00027 PK_Tyr_Ser-Thr 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2693g00027 - - gmx:100784873 896.73