Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2693g00019 ATGTTCCCTTCCACTTACAACAGCTCTTCAGGCCCTTCTTCTTACTACCCTTGTTTCCCTTCATCTTCTTCATCATACCCTCCTTTTACTTACCTTAACCCTGAAAATGCTTCTGCAAATAACACCACCTTTCTTCATGATCCACTTTCTGTTCCATATTTACCCTCTCATCATGCTCCAATAATCCCAGAAACACTTACCAATTGGGCTGTTGCAGACTGTGCTGCTGCAATGCTCAAACATGATGTTAGTACTGGTTCACATTATGGGAATATTTCCAATTCTCTTAAAAAGAAACCTGCAAAGAAAGATAGGCACAGCAAGATTCACACATCTCAGGGTTTGAGGGACAGAAGGGTGAGATTGTCCATTGAGATCGCACGCAAGTTCTTTGATCTTCAAGACACCTTAGGGTTTGACAAAGCAAGCAACACCCTTGAGTGGCTCTTCACCAAATCCAAGAAAGCAATTAAGGAACTAATTCTTAGCAAGCACAGTAGCACTGGTTTTAACAATAGCTTCTCCTCCTCTTCAGATGGCGAAGTGGTTTCTATGATCAACCAAGACAACAGTGATACTACTCCAGAACTAGTAGATTCCAAAGAGAGGAATAAGATGAAGAGGGCACAGAAAGAACCTGCTTGTGTTCGAGCAAAGATGAAGGAAACAAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACAAGTAACAAGATGTGCAACATTAACACAAGTGGTTCTGGGAAGGTACAAGACATGAAGAAAAAGTGCCCTGCAACTGAAAATCCTCAAATCCTGAACCAATTGATGAGGTCACCCATTCAAACTGAAGACACTGCCAGAGATGACTTCACCGTTATTGAGCAATCCATTGTGATCAAGAGAAAGTTGAAGCAATCTTTAATGTCTAATTCTCATCACCAAAACATTGTGATCCCTAAGGAACCAAGTTCTAACACAAGTGACTATCACTCCTTCCCCAATTTGTCTCCAAATTGGGATGCTAATGGTTCCAATGGCCGCTCCAACTTTTGTGCAATAGCCAGCATGAATCTATCTACAGGGCTTCAAATCATTGGAAAATCTTGGGAAGAGTGCAACAATCCCCGTCTATAG 1116 0.4194 MFPSTYNSSSGPSSYYPCFPSSSSSYPPFTYLNPENASANNTTFLHDPLSVPYLPSHHAPIIPETLTNWAVADCAAAMLKHDVSTGSHYGNISNSLKKKPAKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDTLGFDKASNTLEWLFTKSKKAIKELILSKHSSTGFNNSFSSSSDGEVVSMINQDNSDTTPELVDSKERNKMKRAQKEPACVRAKMKETREKARARARERTSNKMCNINTSGSGKVQDMKKKCPATENPQILNQLMRSPIQTEDTARDDFTVIEQSIVIKRKLKQSLMSNSHHQNIVIPKEPSSNTSDYHSFPNLSPNWDANGSNGRSNFCAIASMNLSTGLQIIGKSWEECNNPRL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2693g00019 371 MobiDBLite consensus disorder prediction 90 114 - -
Gabi2693g00019 371 MobiDBLite consensus disorder prediction 236 250 - -
Gabi2693g00019 371 MobiDBLite consensus disorder prediction 229 255 - -
Gabi2693g00019 371 ProSiteProfiles TCP domain profile. 102 160 IPR017887 -
Gabi2693g00019 371 Pfam TCP family transcription factor 101 240 IPR017887 -
Gabi2693g00019 371 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 94 333 IPR005333 GO:0003700
Gabi2693g00019 371 ProSiteProfiles R domain profile. 221 238 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2693g00019 Gabi-Chr2693 247615 251385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2693g00019 55 336 TCP Transcription Factor Family AT1G67260 30.968 1.53e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi2693g00019 TCP 7.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2693g00019 - - gsj:114424268 422.165