Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2693g00011 ATGGCTTTGGAGCTAACTTCCAATCCCAACTCCGTTGACGGCGAGCCAGACGGAGCCGGTAACGGTACGCCGCCTTCCTCCGCCGCCAACGGCGGCGATGACGGGAGACCGGCGGCGAGGCTGCCGCGGTGGACGAGGCAGGAAATCTTGGTCCTCATACAGGGAAAGACCGACGCGGAGAGACGGTTCAAACCGGGACGAGCCTCCGGTTCGGCGTTCGGTTCGAGCGAACCGAAATGGGCCTTGGTATCGTCGTACTGTAAGAATCACGGGGTGAACCGGGAACCGGTTCAGTGCCGGAAGCGGTGGAGCAACCTCGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTCTCAGGTAAGGGACGAAACGGAGTCGTTTTGGTTGATGAGGAACGATTTGAGGAGAGAGAGGAAGTTGCCCGGTTATTTTGACAGGGAGGTGTATGATATCCTCGACGCGTCGCCGTCGCCGTCGTCTGCGGCGGCGGGGACGGCGGCGTTAGGTCTTCCTACGGCGACGGTGACAGAGGCTGTGGGTGATGAGGAGGTGCACCTTTATGACAGTAATCGGAGGGTGGGTGGTGAAGATGGATTGTTCTCGGATTGTGAGAGGGACGAGGTTTTCGCTGCTGCCAAGGATGTTCCTGCGCCTGTTCCTATCTCAGAAAAGCAATGTCAACTGCTGCTTGAAGGCTGCCAAGGGGAAGACAATGCTCAAGGTGCTACCAATGAGAAACAACCAGCCTCAAATCCAGAAATAGGTTCTACATCTCAAGGGGGACGCAAGAGGAAGCGTCTTGCAACCGATGGAGAGGAGGAAACACTGCAAAATCTATTAATTGATGTCTTGGAAAGAAATGGGAAGATGATAAGTGATCAATTTGAAGCCCGGAACATGAATTTTCAGTTGGATCGCCAACAGCAGAAAGACACTGCAAGTAACATAGTTGCTGTACTTGATAAGCTTGCAGATGCTCTAGGGAGAATTGCTGATAAATTATAA 1005 0.5373 MALELTSNPNSVDGEPDGAGNGTPPSSAANGGDDGRPAARLPRWTRQEILVLIQGKTDAERRFKPGRASGSAFGSSEPKWALVSSYCKNHGVNREPVQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDREVYDILDASPSPSSAAAGTAALGLPTATVTEAVGDEEVHLYDSNRRVGGEDGLFSDCERDEVFAAAKDVPAPVPISEKQCQLLLEGCQGEDNAQGATNEKQPASNPEIGSTSQGGRKRKRLATDGEEETLQNLLIDVLERNGKMISDQFEARNMNFQLDRQQQKDTASNIVAVLDKLADALGRIADKL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2693g00011 334 MobiDBLite consensus disorder prediction 237 271 - -
Gabi2693g00011 334 ProSiteProfiles Myb-like domain profile. 36 107 IPR001005 -
Gabi2693g00011 334 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 6 334 - -
Gabi2693g00011 334 Pfam Myb/SANT-like DNA-binding domain 43 130 IPR044822 -
Gabi2693g00011 334 CDD GT1 42 114 - -
Gabi2693g00011 334 MobiDBLite consensus disorder prediction 1 43 - -
Gabi2693g00011 334 Gene3D - 44 112 - -
Gabi2693g00011 334 MobiDBLite consensus disorder prediction 237 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2693g00011 Gabi-Chr2693 120222 123807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2693g00011 43 115 Trihelix Transcription Factor Family AT1G33240 32.877 2.53e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi2693g00011 Myb_DNA-bind_4 9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2693g00011 - - gmx:100788594 515.383